LOC118937102


Basic Information

Item Value
gene id LOC118937102
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79266759 ~ 79266922 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034496.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034496.1 True 164 mRNA 0.56 1 79266759 79266922

Neighbor

gene id symbol gene type direction distance location
LOC118937100 NA coding upstream 2492 79264104 ~ 79264267 (+)
LOC118937099 NA coding upstream 4578 79262018 ~ 79262181 (+)
LOC118937098 NA coding upstream 6664 79259932 ~ 79260095 (+)
LOC118937097 NA coding upstream 8750 79257846 ~ 79258009 (+)
LOC118937096 NA coding upstream 10836 79255760 ~ 79255923 (+)
LOC118937103 NA coding downstream 2492 79269414 ~ 79269577 (+)
LOC118937104 NA coding downstream 5147 79272069 ~ 79272232 (+)
LOC118937105 NA coding downstream 7233 79274155 ~ 79274318 (+)
LOC118936978 NA coding downstream 9083 79276005 ~ 79292617 (+)
LOC118937056 NA coding downstream 11621 79278543 ~ 79278706 (+)
G927579 NA non-coding upstream 72499 79193026 ~ 79194260 (+)
G927572 NA non-coding upstream 92896 79173530 ~ 79173863 (+)
LOC110513571 LOC106602128 non-coding upstream 95714 79167704 ~ 79171045 (+)
G927571 NA non-coding upstream 100596 79165565 ~ 79166163 (+)
LOC110513572 LOC106596357 non-coding upstream 105839 79159507 ~ 79164674 (+)
G927607 NA non-coding downstream 11102 79278024 ~ 79325667 (+)
G927612 NA non-coding downstream 22787 79289709 ~ 79290213 (+)
G927624 NA non-coding downstream 56719 79323641 ~ 79323982 (+)
G927626 NA non-coding downstream 62908 79329830 ~ 79330294 (+)
G927584 NA other upstream 63778 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 201212 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 479196 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 736158 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1541706 77722229 ~ 77734491 (+)
G927606 NA other downstream 14464 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 330723 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 460123 79727045 ~ 79782057 (+)
G928206 NA other downstream 760080 80027002 ~ 80028219 (+)
G928335 NA other downstream 1045022 80311944 ~ 80316569 (+)

Expression


Co-expression Network