LOC118937056


Basic Information

Item Value
gene id LOC118937056
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79278543 ~ 79278706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034454.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcgattttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034454.1 True 164 mRNA 0.56 1 79278543 79278706

Neighbor

gene id symbol gene type direction distance location
LOC118936978 NA coding upstream 2375 79276005 ~ 79292617 (+)
LOC118937105 NA coding upstream 4225 79274155 ~ 79274318 (+)
LOC118937104 NA coding upstream 6311 79272069 ~ 79272232 (+)
LOC118937103 NA coding upstream 8966 79269414 ~ 79269577 (+)
LOC118937102 NA coding upstream 11621 79266759 ~ 79266922 (+)
LOC118937004 LOC106592095 coding downstream 1990 79218822 ~ 79318667 (+)
LOC118937003 NA coding downstream 3913 79282619 ~ 79282782 (+)
LOC118936989 NA coding downstream 5784 79284490 ~ 79284653 (+)
LOC110516120 grk4 coding downstream 75743 79354449 ~ 79431818 (+)
LOC118936794 NA coding downstream 127127 79405833 ~ 79408226 (+)
G927579 NA non-coding upstream 84283 79193026 ~ 79194260 (+)
G927572 NA non-coding upstream 104680 79173530 ~ 79173863 (+)
LOC110513571 LOC106602128 non-coding upstream 107498 79167704 ~ 79171045 (+)
G927571 NA non-coding upstream 112380 79165565 ~ 79166163 (+)
LOC110513572 LOC106596357 non-coding upstream 117623 79159507 ~ 79164674 (+)
G927612 NA non-coding downstream 11003 79289709 ~ 79290213 (+)
G927624 NA non-coding downstream 44935 79323641 ~ 79323982 (+)
G927626 NA non-coding downstream 51124 79329830 ~ 79330294 (+)
G927718 NA non-coding downstream 59432 79338138 ~ 79338891 (+)
G927729 NA non-coding downstream 96811 79375517 ~ 79376706 (+)
G927584 NA other upstream 75562 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 212996 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 490980 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 747942 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1553490 77722229 ~ 77734491 (+)
G927606 NA other downstream 2680 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 318939 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 448339 79727045 ~ 79782057 (+)
G928206 NA other downstream 748296 80027002 ~ 80028219 (+)
G928335 NA other downstream 1033238 80311944 ~ 80316569 (+)

Expression


Co-expression Network