LOC118936989


Basic Information

Item Value
gene id LOC118936989
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79284490 ~ 79284653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034413.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgactcctgcgaatttctcaaatgtggaaatcttgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034413.1 True 164 mRNA 0.55 1 79284490 79284653

Neighbor

gene id symbol gene type direction distance location
LOC118937003 NA coding upstream 1708 79282619 ~ 79282782 (+)
LOC118937004 LOC106592095 coding upstream 3631 79218822 ~ 79318667 (+)
LOC118937056 NA coding upstream 5784 79278543 ~ 79278706 (+)
LOC118936978 NA coding upstream 8322 79276005 ~ 79292617 (+)
LOC118937105 NA coding upstream 10172 79274155 ~ 79274318 (+)
LOC110516120 grk4 coding downstream 69796 79354449 ~ 79431818 (+)
LOC118936794 NA coding downstream 121180 79405833 ~ 79408226 (+)
LOC118936795 NA coding downstream 152238 79435521 ~ 79439621 (+)
LOC110511504 NA coding downstream 158734 79443387 ~ 79574541 (+)
LOC118937092 NA coding downstream 229822 79514475 ~ 79514604 (+)
G927579 NA non-coding upstream 90230 79193026 ~ 79194260 (+)
G927572 NA non-coding upstream 110627 79173530 ~ 79173863 (+)
LOC110513571 LOC106602128 non-coding upstream 113445 79167704 ~ 79171045 (+)
G927571 NA non-coding upstream 118327 79165565 ~ 79166163 (+)
LOC110513572 LOC106596357 non-coding upstream 123570 79159507 ~ 79164674 (+)
G927612 NA non-coding downstream 5056 79289709 ~ 79290213 (+)
G927624 NA non-coding downstream 38988 79323641 ~ 79323982 (+)
G927626 NA non-coding downstream 45177 79329830 ~ 79330294 (+)
G927718 NA non-coding downstream 53485 79338138 ~ 79338891 (+)
G927729 NA non-coding downstream 90864 79375517 ~ 79376706 (+)
G927606 NA other upstream 346 79281386 ~ 79284144 (+)
G927584 NA other upstream 81509 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 218943 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 496927 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 753889 78519650 ~ 78533161 (+)
LOC110514189 LOC106593948 other downstream 312992 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 442392 79727045 ~ 79782057 (+)
G928206 NA other downstream 742349 80027002 ~ 80028219 (+)
G928335 NA other downstream 1027291 80311944 ~ 80316569 (+)
LOC110515606 LOC106597156 other downstream 1537011 80723535 ~ 80922638 (+)

Expression


Co-expression Network