LOC118936793 (LOC106591370)


Basic Information

Item Value
gene id LOC118936793
gene name LOC106591370
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79291191 ~ 79330506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934113.1
TATCTGAGGACGCCGCACGTACGCTTGCCGACATCACCAACGCCGAGATAATTCCTTCGGACagtcagagagaaggggagacagactgactgactgctatCTACCTGAAGCAGGTTTGTCTCTGAGGTATCGACCTGTCACCACTAGCTGCTGAGGCCACAGACACGTGCCTCTGCTTCAGATTATGGCTTCTCGACCTGAACTAGAGGACCAGAAATCCACAGGATCCACAGAGAAGCACAAAGATGATCAACTCAGTGAGAACTCAGAGACAGAAGAGAAGGCTTTTTCCATGGCGCCGGCCCATTCCACTGTGGCCCTGGTAGAGACGGGGTGTGAGGGGGAAGACGACCCGTGGAATTTACCAGAACTACAGGACGGAGCGGCAGCATGGTCagaTCTAGACACCAAGGGGAAGGTGTTGAGGGTGGTGACGTCGGCAGGGAAGGGACTTCTGCTGCTGGGGTTCCTGTACATGTTCATCTGTTCACTAGACATCCTCAGCTCTGCCTTTCAACTGGttggaggTAAAGCAGCAGGTGACATCTTCACAGAGGGCTCAGTGCTGGCGAACCCTCTGGCTGGTCTGGTCATAGGAGTACTGGTCACTCTGCTGGTTCAGagctcctctacctcctcttctatAGTGGTCAGCATGGTCTCCTCTGGactgttacAGGTCCAGATGGCTGTTCCTGTCATCATGGGGACCAACATCGGAACTTCCGTCACCAACACGCTTGTTGCCATGACGCAGGCTGGCGACCGCAACAAGTTCCGCAGGGCCTTTGCTGGAGCTACGGTTCATGACTTCTTCAACTGGCTGTCTGTGCTGGTCTTCCTGCCTTTGGAGgtggcgTCGGGTTACATGTACGAGCTGACCAAGCTGATGGTTGACTCCTTCAACATCCAGGGTGGAGAGAAGACTCCAGAACTCCTCCATGTCATCACCGACCCTCTAACAAAGGCAATCATCGAGTTGGACAAGTCAGTCATCAGTGGTATTGCCACAGGAGACCCGGCTGCCAGGAATAAGAGTCTCATCTTAAAATGGTGCAAAACATTCACCAATGTGACCCTGAGGAATGAGACGGTCCCCGGGCCAGAGAACTGCACCTCCCCAGCCCTCTGTTGGTGTTCCCAGGACCTCTGCTACACTCTGCATAACATCTCAGAGACCTACAACATACAGACATGTAATCATATCTTTGTGAACGTGGACCTGTCTGACCTGGCGATAGGCCTGATCCTGCTGGCTCTGTCTCTGCTGGTGCTGTGTTCCTGTCTCATCCTCATCGTCAAGCTGCTCAACTCCATGCTGAAGGGACAGGTGGCCGTGGTCATCAAGAAGGTGCTCAACACAGatTTCCCGTTCCCCTTCGGCTGGGTGACTGGTTACATCGCCATCCTGGTCGGAGCTGGAATGACCTTCATCGTCCAGAGTAGTTCTGTCTTCACCTCCGCTATCACTCCACTCGTTGGTATTGGTGTGATCAGCATCGAGAGGGCGTACCCTCTGTCGCTAGGGGCCAACATCGGCACGACGACCACGGCTATACTGGCAGCCATGGCAGCACCTGGAGACACACTGGCCAACGCTctacagaTCGCTCTGATTCACTTCGTGTTCAACGTGTCTGGTATCATCTTGTGGTATCCAATCCCCTTCACCCGTATCCCCATCCGATTGGCTAAGGCCCTGGGTGACATCACGGCAGAGTATCGCTGGTTCGCCGGCGTCTACATCATTTCCTGCTTCTTTCTCCTGCCCCTCTTCGTCTTCGGCCTATCGATGGCCGGCTGGAAGGTGCTGGTTGGTGTGGGCGTTCCCATAGTGGCCCTGTTGATCATCATCATTATAGTGAACGTGCTTCAGGCACGGCTACCCAGCTGTCTCCCCGCGGTACTGCACTCCTGGGACTTCCTGCCTCTCTGGACCCACTCCTTAGAACCCTGGGACCGCGTGGTCGCCGTGGTAGCCGCCAAATGCTGCTGCTGCAAGTGTTGCCAGACCggaccggaggaggaggaggaggaggagaaaggaggagggcaTTTCCTGGAGATGTACGACAACCCTGCCATGATGAACAGTGTTGActggggggaaaagagggaggacaAAGAGGATGTCTTGAAAGCAACGCAGCTTTGATGCGCCGCGACACTTCGTAACCGCATCGTATAGGCATTATAACCCTGTGATTATGGTCTTATGACTCTTCTATAACATGGTTATAAAGGTGCTATGTAGGGTTACAAAATTCCAATAACTATTCCAAAAATTCCCTGTTGTTTTCCCAGAAATCCTGGTTAGAGGATTCCCAG

Function

NR:

description
PREDICTED: sodium-dependent phosphate transport protein 2B-like isoform X1

GO:

id name namespace
GO:0035435 phosphate ion transmembrane transport biological_process
GO:0044341 sodium-dependent phosphate transport biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K14683 SLC34A, NPT, nptA; solute carrier family 34 (sodium-dependent phosphate cotransporter)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934113.1 True 2328 mRNA 0.54 15 79291191 79330506

Neighbor

gene id symbol gene type direction distance location
LOC110511089 LOC106591771 coding downstream 54022 79222288 ~ 79237169 (-)
LOC110511088 LOC106592313 coding downstream 68988 79212795 ~ 79222203 (-)
LOC118936937 NA coding downstream 103415 79186013 ~ 79187776 (-)
LOC110513570 NA coding downstream 107628 79175205 ~ 79183563 (-)
LOC118937062 NA coding downstream 132754 79158274 ~ 79158437 (-)
LOC110531688 lrpap1 coding upstream 456124 79786630 ~ 79802558 (-)
LOC118936938 LOC106610425 coding upstream 760056 80090562 ~ 80094309 (-)
LOC118936799 LOC106610425 coding upstream 812188 80142694 ~ 80145965 (-)
LOC118936800 LOC106610425 coding upstream 830107 80160613 ~ 80163884 (-)
LOC110519670 LOC106610423 coding upstream 914577 80245083 ~ 80349169 (-)
G927676 NA non-coding downstream 10039 79276185 ~ 79281152 (-)
G927647 NA non-coding downstream 96940 79191947 ~ 79194251 (-)
G927659 NA non-coding downstream 118160 79172815 ~ 79173031 (-)
G927658 NA non-coding downstream 118391 79172547 ~ 79172800 (-)
G927879 NA non-coding upstream 5005 79335511 ~ 79335721 (-)
G927891 NA non-coding upstream 40072 79370578 ~ 79377153 (-)
G927893 NA non-coding upstream 41610 79372116 ~ 79372872 (-)
G927903 NA non-coding upstream 73592 79404098 ~ 79404390 (-)
G927912 NA non-coding upstream 81835 79412341 ~ 79413105 (-)
G927673 NA other downstream 9401 79274693 ~ 79281790 (-)
G927654 LOC106591987 other downstream 68324 79218515 ~ 79222867 (-)
LOC110497238 LOC106610518 other downstream 781260 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 817132 78464404 ~ 78474168 (-)
G927948 LOC106602109 other upstream 225464 79554714 ~ 79559828 (-)
G927980 LOC106591517 other upstream 255572 79586078 ~ 79587865 (-)
LOC110517091 pi4k2b other upstream 1274263 80580548 ~ 80610829 (-)
G928558 LOC106590778 other upstream 1317870 80648376 ~ 80652202 (-)

Expression


Co-expression Network