LOC110517091 (pi4k2b)


Basic Information

Item Value
gene id LOC110517091
gene name pi4k2b
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80580548 ~ 80610829 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934151.1
GCGCTGTAGAAACAGGAAGCGATTTTTGGCTGATGTGGACAATTTAACGGGTGAAATAATCTCCCGCTAAGTAACTAGCAACAGTCGAGCAAGCCGGTGTCAAAgaaataaacattatttttttaacaaTGGAGCGATGAAAATATGTAGCGTTTGAACTaaaccattttttaaatttgtaagatctggaataaaaataaataagcgATCAAACAATGATGTCGGAATGCGAACCAAACGAGACCGATCCGGTGGTGGCGGATGACATAGCCCCGGTAGCCGCCGCCGCCGCTTCTACCACGGATCTCAACTTTCGGTCCCAGGAGCCACTGTCGACGTTGTTCGATAGGAACACAGTCGGGTCTGGGACAAACCCGGGGGTCGCGATTCGGATCTCGGGTTCGTGTGAAAGTGTTCTTACCGAATTGGAGACGGACGGTTCTGGGGAAGAGACTCTGTTGTTACCGTGTTTATCCGGAGGCACGTCGTCACCTCGGGGCGAGAGGCAGAAGAGGACGAGGCGGAACCGACGGAGTTCATCGTCGGATAAAGATAACCTTACCTCGCCAGgTAACAGTAGTGGAGACTTTAACCATTTCCCCGGTGACCCAGAGTTTGGTGACATCATTCAGAGGGCGGAGCAGGCCATCGAGGGCGGAGTCTTCCCAGAGAGAATCTCTCAGGGTTCTAGCGGGAGTTACTTCGTTAAAGACTCCAAAGGGAAAGTCCTCGGTGTTTTCAAACCAAAGTCTGAAGAGCCTTACGGTCACCTCAACCCTAAATGGACCAAATACTTTCACAAGctgTGCTGTCCATGTTGTTTTGGCCGTGGCTGCCTGATCCCCAACCAGGGCTATCTCTCAGAGGTTGCTGCCTCCCTCGTTGATACCAGGCTAGGACTGGGGGTGGTCCCTAAAACCAAGgctgtgtaTCTAGTCAGTGAGACATTTCACTACAACACTATCGACAGGGCGAAGTCCAGAGGGAAGAAATACGCCCTGGAGATGGTTCCCAAAGTGGGACGACACTTCCACAGAGTGGGACTGCCCCCCAAgCTTGGTTCGTTCCAGCTGTTCGTGGAAGGGTACCATGAGGCTGACTATTGGTTGAGACGTTTTGAGGCGGAGCCTCTCCCAGAGAACATCAGGAAACAGCTCCAGTCTCAGTTTGAGAGGCTCGTCATTCTGGACTACGTCATCAGGAAcacagaCCGAGGGAATGACAACTGGTTGATCAAGTATGAGAAgccaggggaaggagagggagagaagGCCATCCAGATAGCAGCTATAGACAACGGCCTTGCCTTCCCCTTCAAACACCCTGATGAGTGGAGAGCCTACCCGTTCCATTGGGCGTGTCTGCCCCAGGCTAAAGTGCCCTTCTCCCAGGAGACCAGAGAGCTGGTGCTGTCCCGTCTGTCAGACATGAACTTCGTTCAGGACCTCTGTGAAGACCTCTACGAACTGTTTATGGCAGATAAAGGTTTTGACAAGACCATGTTTGAAAGGCAGATGTCAGTCATGAGAGGACAGatCTTAAACCTGAGCCAGGCGTTGAAGGACAATAAAACTCCCATTCAGTTGGTCCAGATGCCCAGAGTCGTGGTGGAGAGACGGCGGactggaggacaggggagggtgGTGACATTAGGAACAGCTTTCACCCAGACCTTCCACTGCAAGAGACCGTTCTTCTCTTcctggtagagggagggatgtctggagagaggacaggggagggtggTGACATTAGGAACGGCTTTCACCCAGACCTTCCACTGCAAGAGGCCGTTCTTCTCTTcctggtagagggagggatgtctggagagggagagaggacaggggagggtggTGACATTAGGAACAGCTTTCACCCAGACCTTCCACTGCAAGAGACCGTTCTTCTCTTcctggtagagggagggatgtcTGGAGGAGCTGCTGCAGGGGTGggtggagagatgaggagggagggaagagagggagcctCCACTGCAACACAATGACCTACCCTCCTggtagagagggtgagagagggagagggtgagagagggagagggtgagagagagaaatgaagggaCTCTCAGAGCATCTTTCCTCCTggtagagagggggtgagagagggagagggtgagagagagaaatgaagggaCTCTCAGAGCATATTTC
>TU1056972
GAAATAATCTCCCGCTAAGTAACTAGCAACAGTCGAGCAAGCCGGTGTCAAAgaaataaacattatttttttaacaaTGGAGCGATGAAAATATGTAGCGTTTGAACTaaaccattttttaaatttgtaagatctggaataaaaataaataagcgATCAAACAATGATGTCGGAATGCGAACCAAACGAGACCGATCCGGTGGTGGCGGATGACATAGCCCCGGTAGCCGCCGCCGCCGCTTCTACCACGGATCTCAACTTTCGGTCCCAGGAGCCACTGTCGACGTTGTTCGATAGGAACACAGTCGGGTCTGGGACAAACCCGGGGGTCGCGATTCGGATCTCGGGTTCGTGTGAAAGTGTTCTTACCGAATTGGAGACGGACGGTTCTGGGGAAGAGACTCTGTTGTTACCGTGTTTATCCGGAGGCACGTCGTCACCTCGGGGCGAGAGGCAGAAGAGGACGAGGCGGAACCGACGGAGTTCATCGTCGGATAAAGATAACCTTACCTCGCCAGgTAACAGTAGTGGAGACTTTAACCATTTCCCCGGTGACCCAGAGTTTGGTGACATCATTCAGAGGGCGGAGCAGGCCATCGAGGGCGGAGTCTTCCCAGAGAGAATCTCTCAGGGTTCTAGCGGGAGTTACTTCGTTAAAGACTCCAAAGGGAAAGTCCTCGGTGTTTTCAAACCAAAGTCTGAAGAGCCTTACGGTCACCTCAACCCTAAATGGACCAAATACTTTCACAAGctgTGCTGTCCATGTTGTTTTGGCCGTGGCTGCCTGATCCCCAACCAGGGCTATCTCTCAGAGGTTGCTGCCTCCCTCGTTGATACCAGGCTAGGACTGGGGGTGGTCCCTAAAACCAAGGTGAGGTGGgaggaggggcgggggggggggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

symbol description
pi4k2b Predicted to enable 1-phosphatidylinositol 4-kinase activity. Acts upstream of or within pectoral fin development. Predicted to be located in cytoplasm and membrane. Predicted to be active in endosome; plasma membrane; and trans-Golgi network. Is expressed in pectoral fin bud. Orthologous to human PI4K2B (phosphatidylinositol 4-kinase type 2 beta).

NR:

description
PREDICTED: phosphatidylinositol 4-kinase type 2-beta

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934151.1 False 2172 mRNA 0.52 11 80580548 80610829
TU1056972 True 936 TUCP 0.52 4 80604769 80610777

Neighbor

gene id symbol gene type direction distance location
LOC118936802 LOC106602096 coding downstream 5165 80546814 ~ 80575383 (-)
LOC110511271 LOC106602098 coding downstream 48396 80494096 ~ 80532152 (-)
LOC110519670 LOC106610423 coding downstream 231379 80245083 ~ 80349169 (-)
LOC118936801 LOC106610411 coding downstream 331438 80248115 ~ 80249110 (-)
LOC118936800 LOC106610425 coding downstream 416664 80160613 ~ 80163884 (-)
LOC110516987 LOC106597865 coding upstream 43124 80652992 ~ 80687561 (-)
LOC118936803 NA coding upstream 64583 80674420 ~ 80675884 (-)
trnae-cuc-166 NA coding upstream 319483 80930312 ~ 80930383 (-)
LOC118936805 LOC106591917 coding upstream 406535 81017364 ~ 81027020 (-)
LOC118966660 LOC106592710 coding upstream 416264 81027093 ~ 81047680 (-)
G928514 NA non-coding downstream 1651 80577792 ~ 80578897 (-)
G928511 NA non-coding downstream 89857 80490394 ~ 80490691 (-)
G928417 NA non-coding downstream 104024 80476294 ~ 80476524 (-)
G928401 NA non-coding downstream 150701 80428339 ~ 80429847 (-)
G928400 NA non-coding downstream 152271 80428063 ~ 80428277 (-)
G928544 NA non-coding upstream 13688 80624517 ~ 80625005 (-)
G928545 NA non-coding upstream 14738 80625567 ~ 80627011 (-)
G928546 NA non-coding upstream 18128 80628957 ~ 80629291 (-)
G928547 NA non-coding upstream 19436 80630265 ~ 80630569 (-)
G928548 NA non-coding upstream 19852 80630681 ~ 80631254 (-)
G927980 LOC106591517 other downstream 992683 79586078 ~ 79587865 (-)
G927948 LOC106602109 other downstream 1022593 79554714 ~ 79559828 (-)
G927893 NA other downstream 1207676 79372116 ~ 79372872 (-)
G927673 NA other downstream 1298758 79274693 ~ 79281790 (-)
LOC110511089 LOC106591771 other downstream 1348968 79222288 ~ 79237169 (-)
G928558 LOC106590778 other upstream 37547 80648376 ~ 80652202 (-)
G929479 NA other upstream 112666 80723495 ~ 80724244 (-)
G929489 NA other upstream 136641 80747470 ~ 80747858 (-)
G929509 NA other upstream 208020 80818849 ~ 80819541 (-)
G928537 NA non-coding downstream 9609 80594202 ~ 80595160 (-)
G928536 NA non-coding downstream 13048 80590116 ~ 80591721 (-)
G928535 NA non-coding downstream 18842 80583652 ~ 80585927 (-)

Expression


Co-expression Network