trnae-cuc-165


Basic Information

Item Value
gene id trnae-cuc-165
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 80930096 ~ 80930167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnae-cuc-165
tccctggtggtctagtggttaggattcggcgctctcaccgccgcggcccgggttcgattcccggtcagggaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-cuc-165 True 72 mRNA 0.65 1 80930096 80930167

Neighbor

gene id symbol gene type direction distance location
LOC110515606 LOC106597156 coding upstream 7458 80723535 ~ 80922638 (+)
LOC118936381 LOC105020813 coding upstream 216332 80691018 ~ 80713764 (+)
LOC110516989 LOC103383728 coding upstream 278118 80626746 ~ 80651979 (+)
LOC110497187 LOC106610426 coding upstream 564910 80361027 ~ 80365186 (+)
LOC110516353 LOC106610561 coding upstream 572018 80353937 ~ 80358078 (+)
LOC118936804 NA coding downstream 5046 80935213 ~ 80936319 (+)
LOC110514786 LOC106592710 coding downstream 12378 80942545 ~ 81014251 (+)
LOC110530284 LOC106592313 coding downstream 287808 81217975 ~ 81220397 (+)
LOC118936811 LOC106593215 coding downstream 311467 81239097 ~ 81247351 (+)
LOC110510686 LOC106597603 coding downstream 443416 81373583 ~ 81386366 (+)
G928669 NA non-coding upstream 3412 80926472 ~ 80926684 (+)
G928598 NA non-coding upstream 4042 80924779 ~ 80926054 (+)
G928651 NA non-coding upstream 91779 80837986 ~ 80838317 (+)
G928650 NA non-coding upstream 97781 80831785 ~ 80832315 (+)
G928613 NA non-coding downstream 240 80930407 ~ 80933289 (+)
G928615 NA non-coding downstream 9015 80939182 ~ 80940283 (+)
G928674 NA non-coding downstream 13242 80943409 ~ 80944947 (+)
G928678 NA non-coding downstream 41708 80971875 ~ 80974212 (+)
G928335 NA other upstream 613527 80311944 ~ 80316569 (+)
G928206 NA other upstream 901877 80027002 ~ 80028219 (+)
LOC110532970 LOC105020822 other upstream 1173052 79727045 ~ 79782057 (+)
LOC110514189 LOC106593948 other upstream 1329324 79597075 ~ 79601686 (+)
G928731 NA other downstream 189398 81119565 ~ 81120877 (+)
G928705 LOC106594836 other downstream 254718 81067884 ~ 81313748 (+)
G928757 NA other downstream 346872 81277039 ~ 81330349 (+)
G928765 NA other downstream 419369 81349536 ~ 81350331 (+)

Expression


Co-expression Network