LOC118966661



Basic Information


Item Value
gene id LOC118966661
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81060967 ~ 81061753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036989403.1
GGATGACAGTACAATAGCCTTCATGCGTCAGTCTCTACCTCGGCCTCACACAGAGGTGAAGTGTATTGAAGGAGACTCCTTACAGGACAGATTCAGGGCTCCAGATGTGACCACTCCTCTCAGAGCCAGTGTCCTGTCTGGACTGGTGGAGGTTGGAGGTGCTGCTGGATACCTGAACTATCCTGTTCAGTCCACACTGCAGGACCGGGTCACTCTACAGTACAGAACCACTACCAGACTGGACATGCTCAGTCACAGGGTGCTTCAGGAGGAGACAGTCAGAACACAACGAAAGGCAACTCATGTGGTCATGGCTGTTCTCTATGGAGCGCAAGCATTCTTTATCTTTGACAGCAAACACATCAACAGACAAAGGAATGCAAGACGAGAGAAAACCAAGATGCTAGATGTAATTAAGAAGATGTTCAACACCTTCAATTCAGAAGATATATTCTCAAGTTTGACAGACTCCGAGAAAGTAAACAGTTTGTTGTATCAATGCACCTTACACAGTGACGTAAACCCTACAACCACAATGGATTATCACACAGCAGTAGAGGTGTACCAGTCCCTGCCAAAGCATCTGGGGCAGCGAGGAGAGAAAGCAGTGCCTGTTCGTGTCTGGCTGTACCCTCTGACGAATCTGGACCATGCAGCGGCTTGTGTTGCATTTGAGATCAGTGAAGACCTGCTGCTCAGAGCTGAGAATGTTCTGGAACACCTGAGACGGGTCACAATGAGGTGCCAGGACACGATGTCAGACCACACCAATGCCTATGTGATTTAA

Function


NR:

description
neoverrucotoxin subunit alpha-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036989403.1 True 787 mRNA 0.49 1 81060967 81061753

Neighbor


gene id symbol gene type direction distance location
LOC118966660 LOC106592710 coding downstream 13287 81027093 ~ 81047680 (-)
LOC118936805 LOC106591917 coding downstream 33947 81017364 ~ 81027020 (-)
trnae-cuc-166 NA coding downstream 130584 80930312 ~ 80930383 (-)
LOC110516987 LOC106597865 coding downstream 373406 80652992 ~ 80687561 (-)
LOC118936803 NA coding downstream 385117 80674420 ~ 80675884 (-)
LOC118936806 NA coding upstream 11310 81073063 ~ 81074909 (-)
LOC118936807 LOC106958643 coding upstream 13169 81074922 ~ 81183169 (-)
LOC118936814 LOC106590958 coding upstream 123530 81185283 ~ 81191137 (-)
LOC110530955 LOC106592313 coding upstream 132848 81194601 ~ 81273979 (-)
LOC110515418 LOC106592313 coding upstream 193791 81255544 ~ 81263037 (-)
G929619 NA non-coding downstream 3602 81056912 ~ 81057365 (-)
G929616 NA non-coding downstream 10690 81050058 ~ 81050277 (-)
G929614 NA non-coding downstream 23051 81036812 ~ 81037916 (-)
G929597 LOC106610364 non-coding downstream 55812 81000677 ~ 81005155 (-)
G929662 NA non-coding upstream 17424 81079177 ~ 81099534 (-)
G929670 NA non-coding upstream 39630 81101383 ~ 81106133 (-)
G929679 NA non-coding upstream 77871 81139624 ~ 81141379 (-)
G929681 NA non-coding upstream 88862 81150615 ~ 81151184 (-)
G929509 NA other downstream 241426 80818849 ~ 80819541 (-)
G929489 NA other downstream 313109 80747470 ~ 80747858 (-)
G929479 NA other downstream 336723 80723495 ~ 80724244 (-)
G928558 LOC106590778 other downstream 408765 80648376 ~ 80652202 (-)
LOC118936810 LOC106596791 other upstream 224226 81285870 ~ 81294695 (-)
LOC110510685 LOC106590958 other upstream 251181 81312816 ~ 81329120 (-)
G929725 NA other upstream 318020 81379773 ~ 81380584 (-)
G929726 NA other upstream 326987 81388740 ~ 81389499 (-)
G929783 NA other upstream 576172 81637925 ~ 81639420 (-)

Expression



Co-expression Network