LOC110515659


Basic Information

Item Value
gene id LOC110515659
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81750222 ~ 81754997 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934202.1
ACggcatagctttcacctgggtcAGGCAGTGTTTGAGAGGAGGACGGACTTGAATTGTCAActgatggggggaaaaaaaagccTGTGTATTTAAACAGCTATAGTTTAATCTAATGACAACAGGTGGCCCTCTTCATTCGGACAAACGAGGTTAGAGCGGGAGTTTGAAACAAGATGAAGATTGTACTGGTCGTGGCTCTCGTCCTGCTGtatgtctggCTTCAGAATGCCCACAGGTCTGACGTCAACCAACAAGGAAGTGTTTGTGATCAGGCTCTTCCTCTGGCCATTTCCAggctcctcttctcccctctctcggTCTACTCCTGGCTGGTCTCTGTGATGGTTgaactcctcttctcccctctctctgtctactcctGGCTGGTCTCTGTGATGGTTaaactcctcttctcctctctgaccctcatctcctcctccctgtattaCACCGTCCTGCTCCTGCTTGCCGGGCCCTGCTGTGTCGCcaccttgtctctgtctgtgctAGTGTCCTGTCTCCGTGTAGTTATCTATATGGTTCACCTAGTGTTGGTGCTCTGTGCTTTGGCAGTGCTCGCCATCATGACTCCACACAAAATGGCCGACGTGAACGGACCCAAAATGGCCGACGTGAACGGACCCAAAATGGCCGACGTGAACGGACCCAAAATGACCGCCGGTGCCACTGCTCGTGACCAAACGTTCTACGACCAACTGAAACTGCAGCTCCGAGACTCGGACAAATCTGGGATCAGTGTTGGGTCGTAAAGGCTTCACAGCGAGGCCGAGGGCATCGTGTTAAGTCTGAAATACAGTTGATCAGTGTTTTTATTTGTTAAAGAATAAACTCCCTTCCTTTGTATCCTTTAGTCTGTTTGGTGAACTTTAGTCCCCATCATTTAATAAAGTGAATTTTAAACTGTTTTTTTGGGGGATTGTAACATTTACACCTGGAAACTGTGAAA
>XM_036934201.1
GAACctcttgtgtgtgtttttttttagttCATTAGGATCTCCGTTAGCTGTGACACATTTTAAAATAGATGGGGAGTACAGAACAGTTAAACAAGAACGAcattaaattaaatttaaaaatacTGTTTTCTTCCAGAGGTTAGAGCGGGAGTTTGAAACAAGATGAAGATTGTACTGGTCGTGGCTCTCGTCCTGCTGtatgtctggCTTCAGAATGCCCACAGGTCTGACGTCAACCAACAAGGAAGTGTTTGTGATCAGGCTCTTCCTCTGGCCATTTCCAggctcctcttctcccctctctcggTCTACTCCTGGCTGGTCTCTGTGATGGTTgaactcctcttctcccctctctctgtctactcctGGCTGGTCTCTGTGATGGTTaaactcctcttctcctctctgaccctcatctcctcctccctgtattaCACCGTCCTGCTCCTGCTTGCCGGGCCCTGCTGTGTCGCcaccttgtctctgtctgtgctAGTGTCCTGTCTCCGTGTAGTTATCTATATGGTTCACCTAGTGTTGGTGCTCTGTGCTTTGGCAGTGCTCGCCATCATGACTCCACACAAAATGGCCGACGTGAACGGACCCAAAATGGCCGACGTGAACGGACCCAAAATGGCCGACGTGAACGGACCCAAAATGACCGCCGGTGCCACTGCTCGTGACCAAACGTTCTACGACCAACTGAAACTGCAGCTCCGAGACTCGGACAAATCTGGGATCAGTGTTGGGTCGTAAAGGCTTCACAGCGAGGCCGAGGGCATCGTGTTAAGTCTGAAATACAGTTGATCAGTGTTTTTATTTGTTAAAGAATAAACTCCCTTCCTTTGTATCCTTTAGTCTGTTTGGTGAACTTTAGTCCCCATCATTTAATAAAGTGAATTTTAAACTGTTTTTTTGGGGGATTGTAACATTTACACCTGGAAACTGTGAAA

Function

NR:

description
uncharacterized protein LOC110515659, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934202.1 False 968 mRNA 0.49 4 81750222 81754997
XM_036934201.1 True 956 mRNA 0.47 3 81750606 81754997

Neighbor

gene id symbol gene type direction distance location
LOC110514629 melk coding upstream 4377 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 64783 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 77884 81617460 ~ 81672338 (+)
LOC118936818 LOC106576580 coding upstream 134893 81558744 ~ 81615329 (+)
LOC110513527 LOC106595035 coding upstream 215231 81526514 ~ 81534991 (+)
LOC118936822 NA coding downstream 174148 81929145 ~ 81942287 (+)
LOC118936939 NA coding downstream 209087 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 225797 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 242424 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 418334 82173331 ~ 82211022 (+)
G928954 NA non-coding upstream 2550 81747039 ~ 81747672 (+)
G928950 NA non-coding upstream 15882 81733943 ~ 81734340 (+)
G928948 NA non-coding upstream 22549 81727468 ~ 81727673 (+)
G928947 NA non-coding upstream 47396 81702543 ~ 81702826 (+)
G928957 NA non-coding downstream 1431 81756428 ~ 81768547 (+)
G928970 NA non-coding downstream 33417 81788414 ~ 81790395 (+)
G928972 NA non-coding downstream 48408 81803405 ~ 81804725 (+)
G928979 NA non-coding downstream 75087 81830084 ~ 81831955 (+)
G928985 NA non-coding downstream 83887 81838884 ~ 81839613 (+)
G928929 NA other upstream 95831 81653391 ~ 81654391 (+)
G929033 NA other downstream 193113 81948110 ~ 81961513 (+)
G929113 NA other downstream 424789 82179786 ~ 82180426 (+)
LOC110510824 LOC106594418 other downstream 458883 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 other downstream 536953 82261288 ~ 82306725 (+)

Expression


Co-expression Network