LOC118936822


Basic Information

Item Value
gene id LOC118936822
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81929145 ~ 81942287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034276.1
caatacatttttatttgtatttgacAGAACCTGGGCTTAACAAGGGTCTGAACTTGGACCTGTTGTAGACGAAATTCACCCTCTCCAGAACCCGTTGGATTAGCGCCATGAGACGGGTTGAGAGACAGAAAACCCCGAACTACTAACGACCTACATACAGgaATAGACAAGAGTCCTTCAAAAGTGCATGGACCACAGAACAacgccccccccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034276.1 True 214 mRNA 0.47 2 81929145 81942287

Neighbor

gene id symbol gene type direction distance location
LOC110515659 NA coding upstream 174148 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 183300 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 243706 81682434 ~ 81685439 (+)
LOC118936819 LOC106602658 coding upstream 256807 81617460 ~ 81672338 (+)
LOC118936818 LOC106576580 coding upstream 313816 81558744 ~ 81615329 (+)
LOC118936939 NA coding downstream 21797 81964084 ~ 81965938 (+)
LOC118936823 pgm2 coding downstream 38507 81980794 ~ 81986434 (+)
LOC118936694 tbc1d1 coding downstream 55134 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 231044 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 270161 82212448 ~ 82232976 (+)
G929026 NA non-coding upstream 2237 81924096 ~ 81926908 (+)
G929025 NA non-coding upstream 5155 81923616 ~ 81923990 (+)
G929023 NA non-coding upstream 12679 81916177 ~ 81916466 (+)
G929022 NA non-coding upstream 14603 81913318 ~ 81914542 (+)
G929021 NA non-coding upstream 16635 81912288 ~ 81912510 (+)
G929040 NA non-coding downstream 16113 81958400 ~ 81959272 (+)
G929042 NA non-coding downstream 19443 81961730 ~ 81962893 (+)
G929046 NA non-coding downstream 26883 81969170 ~ 81969403 (+)
G929049 NA non-coding downstream 27985 81970272 ~ 81970552 (+)
G928929 NA other upstream 274754 81653391 ~ 81654391 (+)
LOC110513527 LOC106595035 other upstream 399263 81526514 ~ 81534991 (+)
G929033 NA other downstream 5823 81948110 ~ 81961513 (+)
G929113 NA other downstream 237499 82179786 ~ 82180426 (+)
LOC118936827 LOC106591767 other downstream 349663 82261288 ~ 82306725 (+)

Expression


Co-expression Network