Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936939 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 81964084 ~ 81965938 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034365.1 | False | 462 | mRNA | 0.46 | 3 | 81964084 | 81964825 |
| TU1057748 | True | 208 | lncRNA | 0.42 | 2 | 81964101 | 81965938 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936822 | NA | coding | upstream | 21797 | 81929145 ~ 81942287 (+) |
| LOC110515659 | NA | coding | upstream | 209087 | 81750222 ~ 81754997 (+) |
| LOC110514629 | melk | coding | upstream | 218239 | 81721230 ~ 81745845 (+) |
| LOC118936820 | NA | coding | upstream | 278645 | 81682434 ~ 81685439 (+) |
| LOC118936819 | LOC106602658 | coding | upstream | 291746 | 81617460 ~ 81672338 (+) |
| LOC118936823 | pgm2 | coding | downstream | 15969 | 81980794 ~ 81986434 (+) |
| LOC118936694 | tbc1d1 | coding | downstream | 32596 | 81997421 ~ 82120937 (+) |
| LOC118936825 | LOC106593007 | coding | downstream | 208506 | 82173331 ~ 82211022 (+) |
| LOC110510824 | LOC106594418 | coding | downstream | 247623 | 82212448 ~ 82232976 (+) |
| LOC118936827 | LOC106591767 | coding | downstream | 296463 | 82261288 ~ 82306725 (+) |
| G929042 | NA | non-coding | upstream | 1191 | 81961730 ~ 81962893 (+) |
| G929040 | NA | non-coding | upstream | 4812 | 81958400 ~ 81959272 (+) |
| G929031 | NA | non-coding | upstream | 30765 | 81933118 ~ 81933319 (+) |
| G929026 | NA | non-coding | upstream | 37176 | 81924096 ~ 81926908 (+) |
| G929025 | NA | non-coding | upstream | 40094 | 81923616 ~ 81923990 (+) |
| G929046 | NA | non-coding | downstream | 4345 | 81969170 ~ 81969403 (+) |
| G929049 | NA | non-coding | downstream | 5447 | 81970272 ~ 81970552 (+) |
| G929053 | NA | non-coding | downstream | 26042 | 81990867 ~ 81991508 (+) |
| G929062 | NA | non-coding | downstream | 29002 | 81993827 ~ 81994631 (+) |
| G929063 | NA | non-coding | downstream | 31778 | 81996603 ~ 81996820 (+) |
| G929033 | NA | other | upstream | 2571 | 81948110 ~ 81961513 (+) |
| G928929 | NA | other | upstream | 309693 | 81653391 ~ 81654391 (+) |
| LOC118936818 | LOC106576580 | other | upstream | 368332 | 81558744 ~ 81615329 (+) |
| G929113 | NA | other | downstream | 214961 | 82179786 ~ 82180426 (+) |
| G929159 | NA | other | downstream | 343978 | 82308803 ~ 82309572 (+) |
