LOC118936823 (pgm2)


Basic Information

Item Value
gene id LOC118936823
gene name pgm2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 81980794 ~ 81986434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934203.1
TGCCCCTCCTCTCGCCCCTCGTTGTGTTGCAGGGTACATGTGTGGTTCTGCCGTGCTGGATAAAGACGGGGTCAGTGCGGCAGCCATCGCTGGGGAGATGACATCATACCTGGCCGCGAAGAACATCACGCTGTCACAACAACTGACAGCTGTCTACGAGGAgtatggGTACCACATCACTAAGAACTCCTACTTCATCTGTCACGACCAGGAAGTGATCCGGGCCATGTTTGACCGGCTGCGTCACTACGGCAACCAGGAGGATGTGTCGTACCCCAGGCAGTGTGGAGGCGTCGCTATCACCGCTGTGCGAGACCTCACTACTGGATACGACAGCAGCCAGGCGGACAACAAGGCTgtcctcccctcctcccccagtaGTCAGATGATCACGTTTAGTTTCTCTAACGGGGGCGTGGCCACCATGAGGACCAGCGGAACGGAACCCAAGATCAAGTACTACACTGAGCTGTGTGCTGCCCCCGGCAACAGtgaTGTTAAAGGTTTACAGAAGGAGTTAGATGACCTGGTTAATGCCATCGTAGAGGACTTCTTCCAGCCCCAGAAGAATAACCTGCTGTCCAAGCCTGAGTAACACACATCAGTGGCTTGTAAA

Function

symbol description
pgm2 Predicted to enable intramolecular transferase activity, phosphotransferases and magnesium ion binding activity. Predicted to act upstream of or within glucose metabolic process. Orthologous to human PGM2 (phosphoglucomutase 2).

NR:

description
PREDICTED: phosphoglucomutase-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934203.1 True 616 mRNA 0.55 4 81980794 81986434

Neighbor

gene id symbol gene type direction distance location
LOC118936939 NA coding upstream 15969 81964084 ~ 81965938 (+)
LOC118936822 NA coding upstream 38507 81929145 ~ 81942287 (+)
LOC110515659 NA coding upstream 225797 81750222 ~ 81754997 (+)
LOC110514629 melk coding upstream 234949 81721230 ~ 81745845 (+)
LOC118936820 NA coding upstream 295355 81682434 ~ 81685439 (+)
LOC118936694 tbc1d1 coding downstream 10987 81997421 ~ 82120937 (+)
LOC118936825 LOC106593007 coding downstream 186897 82173331 ~ 82211022 (+)
LOC110510824 LOC106594418 coding downstream 226014 82212448 ~ 82232976 (+)
LOC118936827 LOC106591767 coding downstream 274854 82261288 ~ 82306725 (+)
LOC118936828 wdr19 coding downstream 330287 82316721 ~ 82401240 (+)
G929049 NA non-coding upstream 10242 81970272 ~ 81970552 (+)
G929046 NA non-coding upstream 11391 81969170 ~ 81969403 (+)
G929042 NA non-coding upstream 17901 81961730 ~ 81962893 (+)
G929040 NA non-coding upstream 21522 81958400 ~ 81959272 (+)
G929053 NA non-coding downstream 4433 81990867 ~ 81991508 (+)
G929062 NA non-coding downstream 7393 81993827 ~ 81994631 (+)
G929063 NA non-coding downstream 10169 81996603 ~ 81996820 (+)
G929064 NA non-coding downstream 13940 82000374 ~ 82000623 (+)
G929068 NA non-coding downstream 20830 82007264 ~ 82007759 (+)
G929033 NA other upstream 19281 81948110 ~ 81961513 (+)
LOC118936819 LOC106602658 other upstream 324286 81617460 ~ 81672338 (+)
G928929 NA other upstream 326403 81653391 ~ 81654391 (+)
LOC118936818 LOC106576580 other upstream 385042 81558744 ~ 81615329 (+)
G929113 NA other downstream 193352 82179786 ~ 82180426 (+)
G929159 NA other downstream 322369 82308803 ~ 82309572 (+)

Expression


Co-expression Network