LOC118937117


Basic Information

Item Value
gene id LOC118937117
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83744673 ~ 83744836 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034511.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034511.1 True 164 mRNA 0.56 1 83744673 83744836

Neighbor

gene id symbol gene type direction distance location
LOC110512947 NA coding upstream 107933 83586588 ~ 83639961 (+)
LOC110512943 LOC106602128 coding upstream 181686 83560090 ~ 83562987 (+)
LOC118936837 LOC106592595 coding upstream 187274 83540003 ~ 83557399 (+)
LOC118936836 NA coding upstream 601145 83139955 ~ 83143528 (+)
LOC110515357 LOC100196562 coding upstream 613644 83115455 ~ 83131029 (+)
LOC118937030 NA coding downstream 1823 83746659 ~ 83746784 (+)
LOC118937033 NA coding downstream 3817 83748653 ~ 83748778 (+)
LOC118936990 NA coding downstream 5811 83750647 ~ 83750810 (+)
LOC118937031 NA coding downstream 7830 83752666 ~ 83752791 (+)
LOC118937118 NA coding downstream 9824 83754660 ~ 83754823 (+)
G930461 NA non-coding upstream 4759 83739627 ~ 83739914 (+)
G930459 NA non-coding upstream 5280 83739170 ~ 83739393 (+)
G930384 NA non-coding upstream 19375 83725078 ~ 83725298 (+)
G930350 LOC106593304 non-coding upstream 21625 83690290 ~ 83723048 (+)
G930377 NA non-coding upstream 43048 83700687 ~ 83701625 (+)
G930469 NA non-coding downstream 2022 83746858 ~ 83759436 (+)
G930472 NA non-coding downstream 3667 83748503 ~ 83789810 (+)
G930466 NA non-coding downstream 73292 83818128 ~ 83830444 (+)
G930485 NA non-coding downstream 98951 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 99691 83844527 ~ 83848499 (+)
G929370 NA other upstream 709182 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 788342 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 946351 82793509 ~ 82811450 (+)
G929305 NA other upstream 982185 82761605 ~ 82762488 (+)
LOC110518749 LOC106592297 other downstream 148758 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 249837 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 391737 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 410103 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 931723 84676559 ~ 84677078 (+)

Expression


Co-expression Network