LOC118936990


Basic Information

Item Value
gene id LOC118936990
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83750647 ~ 83750810 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034414.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcaaatttctcaaatgtggaaatatcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034414.1 True 164 mRNA 0.55 1 83750647 83750810

Neighbor

gene id symbol gene type direction distance location
LOC118937033 NA coding upstream 1869 83748653 ~ 83748778 (+)
LOC118937030 NA coding upstream 3863 83746659 ~ 83746784 (+)
LOC118937117 NA coding upstream 5811 83744673 ~ 83744836 (+)
LOC110512947 NA coding upstream 113907 83586588 ~ 83639961 (+)
LOC110512943 LOC106602128 coding upstream 187660 83560090 ~ 83562987 (+)
LOC118937031 NA coding downstream 1856 83752666 ~ 83752791 (+)
LOC118937118 NA coding downstream 3850 83754660 ~ 83754823 (+)
LOC118936970 NA coding downstream 5699 83756509 ~ 83756672 (+)
LOC118937015 NA coding downstream 7634 83758444 ~ 83758590 (+)
LOC118937044 NA coding downstream 9552 83760362 ~ 83760473 (+)
G930461 NA non-coding upstream 10733 83739627 ~ 83739914 (+)
G930459 NA non-coding upstream 11254 83739170 ~ 83739393 (+)
G930384 NA non-coding upstream 25349 83725078 ~ 83725298 (+)
G930377 NA non-coding upstream 49022 83700687 ~ 83701625 (+)
G930374 NA non-coding upstream 53491 83693390 ~ 83697156 (+)
G930466 NA non-coding downstream 67318 83818128 ~ 83830444 (+)
G930485 NA non-coding downstream 92977 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 93717 83844527 ~ 83848499 (+)
G930487 NA non-coding downstream 98034 83848844 ~ 83849076 (+)
G930498 NA non-coding downstream 119372 83870182 ~ 84086362 (+)
G929370 NA other upstream 715156 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 794316 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 952325 82793509 ~ 82811450 (+)
G929305 NA other upstream 988159 82761605 ~ 82762488 (+)
LOC110518749 LOC106592297 other downstream 142784 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 243863 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 385763 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 404129 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 925749 84676559 ~ 84677078 (+)

Expression


Co-expression Network