LOC118936957


Basic Information

Item Value
gene id LOC118936957
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83823164 ~ 83823327 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034383.1
atacttacctggcaagggagacaccgtgatcacgaagaCGGTTCACCCggggcgaggctcagccattgcactccggctgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034383.1 True 164 mRNA 0.56 1 83823164 83823327

Neighbor

gene id symbol gene type direction distance location
LOC118937127 NA coding upstream 1789 83821212 ~ 83821375 (+)
LOC118937024 NA coding upstream 3916 83819109 ~ 83819248 (+)
LOC118936956 NA coding upstream 5925 83817076 ~ 83817239 (+)
LOC118937126 NA coding upstream 7788 83815213 ~ 83815376 (+)
LOC118936976 NA coding upstream 9616 83813387 ~ 83813548 (+)
LOC118937128 NA coding downstream 1871 83825198 ~ 83825361 (+)
LOC118936958 NA coding downstream 3823 83827150 ~ 83827313 (+)
LOC118936943 NA coding downstream 5857 83829184 ~ 83829347 (+)
LOC118936944 NA coding downstream 7809 83831136 ~ 83831299 (+)
LOC118936954 NA coding downstream 9761 83833088 ~ 83833251 (+)
G930472 NA non-coding upstream 33354 83748503 ~ 83789810 (+)
G930469 NA non-coding upstream 63728 83746858 ~ 83759436 (+)
G930465 NA non-coding upstream 66494 83744681 ~ 83756670 (+)
G930461 NA non-coding upstream 83250 83739627 ~ 83739914 (+)
G930459 NA non-coding upstream 83771 83739170 ~ 83739393 (+)
G930485 NA non-coding downstream 20460 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 21200 83844527 ~ 83848499 (+)
G930487 NA non-coding downstream 25517 83848844 ~ 83849076 (+)
G930498 NA non-coding downstream 46855 83870182 ~ 84086362 (+)
G930500 NA non-coding downstream 55771 83879098 ~ 83950072 (+)
LOC110512947 NA other upstream 183203 83586588 ~ 83639961 (+)
G929370 NA other upstream 787673 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 866833 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 1024842 82793509 ~ 82811450 (+)
G929305 NA other upstream 1060676 82761605 ~ 82762488 (+)
LOC110518749 LOC106592297 other downstream 70267 83893530 ~ 83968790 (+)
LOC110516172 htt other downstream 171346 83981478 ~ 84112196 (+)
LOC110515513 LOC106594142 other downstream 313246 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 331612 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 853232 84676559 ~ 84677078 (+)

Expression


Co-expression Network