LOC118936944


Basic Information

Item Value
gene id LOC118936944
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 83831136 ~ 83831299 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034369.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034369.1 True 164 mRNA 0.56 1 83831136 83831299

Neighbor

gene id symbol gene type direction distance location
LOC118936943 NA coding upstream 1789 83829184 ~ 83829347 (+)
LOC118936958 NA coding upstream 3823 83827150 ~ 83827313 (+)
LOC118937128 NA coding upstream 5775 83825198 ~ 83825361 (+)
LOC118936957 NA coding upstream 7809 83823164 ~ 83823327 (+)
LOC118937127 NA coding upstream 9761 83821212 ~ 83821375 (+)
LOC118936954 NA coding downstream 1789 83833088 ~ 83833251 (+)
LOC118937032 NA coding downstream 4817 83836116 ~ 83836259 (+)
LOC110518749 LOC106592297 coding downstream 62231 83893530 ~ 83968790 (+)
LOC118936843 NA coding downstream 119549 83950848 ~ 83953723 (+)
LOC110516172 htt coding downstream 150179 83981478 ~ 84112196 (+)
G930466 NA non-coding upstream 692 83818128 ~ 83830444 (+)
G930472 NA non-coding upstream 41326 83748503 ~ 83789810 (+)
G930469 NA non-coding upstream 71700 83746858 ~ 83759436 (+)
G930465 NA non-coding upstream 74466 83744681 ~ 83756670 (+)
G930461 NA non-coding upstream 91222 83739627 ~ 83739914 (+)
G930485 NA non-coding downstream 12488 83843787 ~ 83844002 (+)
G930486 NA non-coding downstream 13228 83844527 ~ 83848499 (+)
G930487 NA non-coding downstream 17545 83848844 ~ 83849076 (+)
G930498 NA non-coding downstream 38883 83870182 ~ 84086362 (+)
G930500 NA non-coding downstream 47799 83879098 ~ 83950072 (+)
LOC110512947 NA other upstream 191175 83586588 ~ 83639961 (+)
G929370 NA other upstream 795645 83035112 ~ 83035491 (+)
LOC110512617 n4bp2 other upstream 874805 82905730 ~ 82956331 (+)
LOC118936832 LOC105009164 other upstream 1032814 82793509 ~ 82811450 (+)
G929305 NA other upstream 1068648 82761605 ~ 82762488 (+)
LOC110515513 LOC106594142 other downstream 305274 84130437 ~ 84282587 (+)
G930572 LOC106593948 other downstream 323640 84154939 ~ 84155714 (+)
G931108 LOC107756720 other downstream 845260 84676559 ~ 84677078 (+)

Expression


Co-expression Network