Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936844 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 84114738 ~ 84115920 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034299.1 | True | 1133 | mRNA | 0.43 | 2 | 84114738 | 84115920 |
84,113,200
84,113,600
84,114,000
84,114,400
84,114,800
84,115,200
84,115,600
84,116,000
84,116,400
84,116,800
84,117,200
84,117,600
84,118,000
84,118,400
84,118,800
84,119,200
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936842 | LOC106591370 | coding | downstream | 236720 | 83846363 ~ 83878018 (-) |
| LOC118936838 | LOC106591771 | coding | downstream | 391478 | 83704588 ~ 83723260 (-) |
| LOC110497195 | LOC106591771 | coding | downstream | 416000 | 83690223 ~ 83698738 (-) |
| LOC118966664 | LOC106594467 | coding | downstream | 427233 | 83678667 ~ 83687505 (-) |
| LOC110497194 | LOC106592313 | coding | downstream | 434413 | 83674535 ~ 83680325 (-) |
| LOC110532978 | lrpap1 | coding | upstream | 242287 | 84358207 ~ 84373734 (-) |
| LOC118966665 | NA | coding | upstream | 519526 | 84635446 ~ 84636558 (-) |
| LOC118966667 | NA | coding | upstream | 589241 | 84705161 ~ 84708163 (-) |
| LOC118936941 | LOC106610423 | coding | upstream | 599260 | 84715180 ~ 84728235 (-) |
| LOC118936849 | LOC106602098 | coding | upstream | 873149 | 84989069 ~ 85012466 (-) |
| G930869 | NA | non-coding | downstream | 217 | 84114216 ~ 84114521 (-) |
| G930868 | NA | non-coding | downstream | 1521 | 84112620 ~ 84113217 (-) |
| G930855 | NA | non-coding | downstream | 22889 | 84091501 ~ 84091849 (-) |
| G930853 | NA | non-coding | downstream | 28059 | 84086158 ~ 84086679 (-) |
| G930850 | htt | non-coding | downstream | 31130 | 84079638 ~ 84083608 (-) |
| G930872 | NA | non-coding | upstream | 9874 | 84125794 ~ 84126205 (-) |
| G930875 | NA | non-coding | upstream | 16109 | 84132029 ~ 84132306 (-) |
| G930876 | NA | non-coding | upstream | 17331 | 84133251 ~ 84133544 (-) |
| G930877 | NA | non-coding | upstream | 18083 | 84134003 ~ 84134208 (-) |
| G930878 | NA | non-coding | upstream | 18804 | 84134724 ~ 84135043 (-) |
| G930820 | NA | other | downstream | 95211 | 84018275 ~ 84019527 (-) |
| G930757 | NA | other | downstream | 239493 | 83874895 ~ 83875245 (-) |
| G930403 | LOC106591771 | other | downstream | 416229 | 83621645 ~ 83698509 (-) |
| LOC110512946 | LOC106597711 | other | downstream | 502908 | 83606666 ~ 83611830 (-) |
| G930397 | NA | other | downstream | 510609 | 83586652 ~ 83636950 (-) |
| G931382 | NA | other | upstream | 935867 | 85051787 ~ 85053554 (-) |
| LOC118936850 | pi4k2b | other | upstream | 974856 | 85062869 ~ 85091288 (-) |
| G931501 | NA | other | upstream | 1137368 | 85253288 ~ 85257533 (-) |
| G931561 | NA | other | upstream | 1312022 | 85427942 ~ 85431533 (-) |
| G931640 | NA | other | upstream | 1362264 | 85478184 ~ 85478650 (-) |
