LOC118936865


Basic Information

Item Value
gene id LOC118936865
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 86395193 ~ 86396534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034314.1
cttccccctcacctggttgtctaggacttccccctcacctggttgtctaggacctcacctggttgtctaggacctcccctcacctggttgtctaggacctcccctcacctggttgtctaggactTCATACTGACACATATTAAAAACTAAAACCAGCAGATGActgccctccatggaatgagtttggacACCTTCTGATCTAGTGCCTGTCGACAGAAGCACAGATCCAGGGACAGTCTCCATTTCCTCAACCTTAACCAGTGTAGTATAAGTTAActagtagaggggggggggggggatctgcaTGAAAACTGACCTGAGATCAGTGTCGTGTTTTATAAGATGACCACTTCCTCTCTTTTACAGGTGACATTCCATTCCTCCTTAAACATGTTTCCTTAAAGTGTGTCGCGTTTTATTCCTTCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCGCGTTTGAATCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCGCGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCCCGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCGCGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCACGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCGCGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCACGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTCGCGTTTTATTCCCTCCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTTGAGGTGTTGCCTTTTATTCCTTCCCCCCACTGATTCAGTAGCAGGAAGGAGTTTCGAGGTGTTACGATATCATAGAGCCTTTTAGCGTCACAGAATAACAGTTTACTGAAACCGTTAATTCTTTACAGAATAACAGTTTACTAAAAGCGTTAATTCTTTACAGATTAACAGTTTTACTGAAAGCGTTAATACAACGTTTGTTAGTTTGTACATATACCAGTAATGGGATCCATATTTACTTGTTTATCTATCATGTCTTTTACGTTtgtaggagaggttgttgttttAACTCTATTTTTTTTGTCAGatgatctgtctgtctgcgtaAGATTTATTGTTAATAATTGTAAAGGATCAAAATAAATGGAGTTTGTAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034314.1 True 1284 mRNA 0.45 2 86395193 86396534

Neighbor

gene id symbol gene type direction distance location
LOC110514239 LOC106594008 coding upstream 127 86368819 ~ 86395066 (+)
LOC118936864 NA coding upstream 58663 86334061 ~ 86336728 (+)
LOC118936863 LOC104951401 coding upstream 71363 86287581 ~ 86323830 (+)
LOC110514691 uba6 coding upstream 109545 86230780 ~ 86285648 (+)
LOC118936862 NA coding upstream 136718 86257257 ~ 86258475 (+)
LOC118936866 NA coding downstream 8923 86405457 ~ 86409872 (+)
LOC118936868 NA coding downstream 178931 86575465 ~ 86671952 (+)
pgm2 pgm2 coding downstream 280056 86676590 ~ 86696929 (+)
LOC110518842 tbc1d1 coding downstream 307872 86704406 ~ 86830606 (+)
LOC118936871 NA coding downstream 423706 86820240 ~ 86821014 (+)
G932078 NA non-coding upstream 19558 86373840 ~ 86375635 (+)
G932075 NA non-coding upstream 28690 86366219 ~ 86366503 (+)
G932073 NA non-coding upstream 36829 86357551 ~ 86358364 (+)
G932071 NA non-coding upstream 46160 86348285 ~ 86349033 (+)
G932174 NA non-coding downstream 5581 86402115 ~ 86403390 (+)
G932177 NA non-coding downstream 14936 86411470 ~ 86414693 (+)
G932179 NA non-coding downstream 21500 86418034 ~ 86418679 (+)
G932182 NA non-coding downstream 25762 86422296 ~ 86440685 (+)
G932184 NA non-coding downstream 44490 86441024 ~ 86475840 (+)
LOC110513338 LOC106595035 other upstream 191009 86201044 ~ 86209191 (+)
LOC110528614 LOC106592313 other upstream 382652 86008932 ~ 86017575 (+)
LOC110528615 LOC106597603 other upstream 442520 85951030 ~ 85957092 (+)
LOC118936495 LOC106594836 other upstream 492581 85900556 ~ 85920664 (+)
LOC118966668 LOC106592313 other upstream 500456 85893094 ~ 85950607 (+)
LOC110511479 klhl5 other downstream 601252 86997786 ~ 87054035 (+)
LOC110516832 wdr19 other downstream 722548 87057752 ~ 87129649 (+)
G932422 NA other downstream 798985 87195519 ~ 87288556 (+)

Expression


Co-expression Network