G844658


Basic Information

Item Value
gene id G844658
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 518217 ~ 519403 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU961842
aaaaaaaaaacaacaacatgtattACCAAAATTTCTGTACTTACACAGTATATACATTGCCTTGTGCTAACGCcctccaaaaaaaaaaatgtatcgcTTAGATAACAGTGGTGGGAACTCCTTTAAAAATAGATCAATTGGCTAATATACACATCTGAAAGGTATAAGGGATCCCAAAATCAAACAACATTTTTCACTATTTACCACATTTAGCAGATGCAATATACAGCCAGCCGTATGTATGCACAAGGAGAGGGGCTTAGAACCCGTATTAACAAAACTTAAGACAAATTATACTGTTTGTAAATAAGAACACTGACTGGTCTGTTATTATGTTGAATAAACCATACGTTTTTATCTTATCGGGATTTAATTAGGGAAAGACATTTTCTCTGCTCTTATTTGAACTAGAGTTGTAAAATAAATGGCAAAGTAGCAGGTGTTACTTGGGGGGAGGGTGAAGGAAGCCACACAGCTTAGCTAAAATAGAGCTTTCTCACAATGTTTTCAATGTTCCATCCAAGGCCAAGTTTTGGCCCAAACTcttaaaatatataaaaaagttaaaaataaataaataaaagaacaaTAAAATAGTTAAACTTCTAATATCCATACAACACAACTCTACTACCCAACATATGGTGTGGTTCTCCATCCCCATGGCAACCGATGGTGCTGTAGAAACTGTTGCCGTGGCGACACTGTGCCGCGGGGCTTCTGAACAGGAACATACAGACGGACACATCATGGATACACAGACAGCAGGAATTAATTAGCATGATTATTAATCATGATTGTGTATATTAAAAAGCAAGacattaattgattgattgttgTTTCATTTGATATAAACCTTCGCCCCTGCATCGATTTCGTACATTTTTGGTATTCGGAATTATACCGAGTGTCATTTTAAGGATCAGTTGGTTTTTAAAGACCCCCATATGGAAACGTGATGAACAAAGAACACAGATATCATATCTCACAACACAAAACCTCTGTCTATTATATCGTACAACGGGGCATCTTCTCCTGAGTACAGTTGGTGTTGTACAACCTTTGTCATTTCGTACCGTACAGGGCGCAACTTCTCCTGTTTCCAAGTCTATCATTCTCTTGAATACAATTTTAGTCAGGGTACAGTGAAGAGGAcagtgaaggggagagagaaggggacagtggAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU961842 True 1187 lncRNA 0.37 1 518217 519403

Neighbor

gene id symbol gene type direction distance location
LOC110533228 LOC106604062 coding downstream 306812 131144 ~ 211405 (-)
LOC118966673 NA coding downstream 328934 185389 ~ 189283 (-)
rpl23a rpl23a coding downstream 390510 120264 ~ 127707 (-)
LOC110533227 LOC105006947 coding downstream 399803 99960 ~ 118414 (-)
LOC110533226 LOC107554284 coding downstream 420489 92131 ~ 97728 (-)
LOC110533253 bach1 coding upstream 86991 606394 ~ 613031 (-)
sodc sodc coding upstream 98074 617477 ~ 624914 (-)
mis18a LOC106604044 coding upstream 178127 697530 ~ 725493 (-)
LOC110534824 LOC106604036 coding upstream 273547 792950 ~ 823863 (-)
LOC118966676 NA coding upstream 360244 879647 ~ 885369 (-)
G844657 NA non-coding downstream 3453 514269 ~ 514764 (-)
G844655 NA non-coding downstream 5627 511849 ~ 512590 (-)
G844623 NA non-coding downstream 62927 453561 ~ 455290 (-)
G844574 NA non-coding downstream 156256 355607 ~ 361961 (-)
G844551 NA non-coding downstream 208583 309327 ~ 309634 (-)
G844679 NA non-coding upstream 44506 563909 ~ 564750 (-)
G844685 NA non-coding upstream 70201 589604 ~ 596700 (-)
G844662 NA non-coding upstream 84669 604072 ~ 604817 (-)
G844695 NA non-coding upstream 108145 627548 ~ 627824 (-)
G844703 NA non-coding upstream 121994 641397 ~ 642242 (-)
heatr6 heatr6 other downstream 453517 44407 ~ 91388 (-)
G844686 NA other upstream 52122 571525 ~ 573938 (-)
G844794 NA other upstream 262621 782024 ~ 782738 (-)
G844847 NA other upstream 325270 844673 ~ 846752 (-)
G844866 LOC106591684 other upstream 364757 884160 ~ 890758 (-)
G844975 NA other upstream 506251 1025654 ~ 1027442 (-)

Expression


Co-expression Network