G844686


Basic Information

Item Value
gene id G844686
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 571525 ~ 573938 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU961894
atgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtacagtaatacctagcaatatgcttgtgtttctagctccaacagtaatatctagcaatatgcttgtgtttctagctctaacagtagagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctagcagtatgcttgtgtttctagctccaacagtacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctagcagtatgcttgtgtttctagctccaacagtacagtaatacctagcaatatgcttgtgttcctatctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtacagtaatacctaacaatatgcttgtgtttctagctccaacagtacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctctaacagtagagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctaacaatttgcttgtgtttctagctccgacagtaatacctagcaatatgcctgtgtttctagctccaacagtaatacctaacaatatgattgtgtttctagctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtaatacctaacaatatgcttgtgtttctagctccaacagtaatacctagcagtatgcttgtgtttctagctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtaatacctagcaatatgcttgtgtttctagctccaacagtacagtaatacctagcaatattcttgtgttcctagctccaacactacagtaatacctagcaatatgcttgtgttcctagctccaacactacagtaatacctagcaatatgcttgtgttcctagctccaacactacagtaatacctagcaatatgcttgtgttcctagctccaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU961894 True 1331 TUCP 0.38 2 571525 573938

Neighbor

gene id symbol gene type direction distance location
LOC110533228 LOC106604062 coding downstream 360120 131144 ~ 211405 (-)
LOC118966673 NA coding downstream 382242 185389 ~ 189283 (-)
rpl23a rpl23a coding downstream 443818 120264 ~ 127707 (-)
LOC110533227 LOC105006947 coding downstream 453111 99960 ~ 118414 (-)
LOC110533226 LOC107554284 coding downstream 473797 92131 ~ 97728 (-)
LOC110533253 bach1 coding upstream 32456 606394 ~ 613031 (-)
sodc sodc coding upstream 43539 617477 ~ 624914 (-)
mis18a LOC106604044 coding upstream 123592 697530 ~ 725493 (-)
LOC110534824 LOC106604036 coding upstream 219012 792950 ~ 823863 (-)
LOC118966676 NA coding upstream 305709 879647 ~ 885369 (-)
G844679 NA non-coding downstream 6775 563909 ~ 564750 (-)
G844658 NA non-coding downstream 52122 518217 ~ 519403 (-)
G844657 NA non-coding downstream 56761 514269 ~ 514764 (-)
G844655 NA non-coding downstream 58935 511849 ~ 512590 (-)
G844623 NA non-coding downstream 116235 453561 ~ 455290 (-)
G844685 NA non-coding upstream 15666 589604 ~ 596700 (-)
G844662 NA non-coding upstream 30134 604072 ~ 604817 (-)
G844695 NA non-coding upstream 53610 627548 ~ 627824 (-)
G844703 NA non-coding upstream 67459 641397 ~ 642242 (-)
G844705 NA non-coding upstream 74456 648394 ~ 651766 (-)
heatr6 heatr6 other downstream 506825 44407 ~ 91388 (-)
G844794 NA other upstream 208086 782024 ~ 782738 (-)
G844847 NA other upstream 270735 844673 ~ 846752 (-)
G844866 LOC106591684 other upstream 310222 884160 ~ 890758 (-)
G844975 NA other upstream 451716 1025654 ~ 1027442 (-)
G844976 NA other upstream 454202 1028140 ~ 1029996 (-)

Expression


Co-expression Network