G844968


Basic Information

Item Value
gene id G844968
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 1018772 ~ 1019917 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU962272
CAATACAGAGAAGGACAACCCACAGAGATATCCGAACACAATAAAGAGATGGACAACCCACAGAGATATCAGGACACAATAAAGAGATGGACAACCCACAGAGATAGCTAGAATCAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTAGAATCAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGATTGACAACCCACAGAGATATCCGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGGGAAGGACAACCCACAGAGATATCAGAACACAATAAAGAGATGGACAACCCACAGAGATATCAGGACAAAATAAAGAGATGGACAACCCACAGAGTTATCAGGACACAATACAGAGATGGACAACCCACAGAGATATCCGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGAAGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGAAGGACAACCCACAGAGATATCTGGAATTAGAACACAATAAAGAGAAGGACAACCCACAGAGATAGCTGGAATTAGAACAAAATAAAGAGATGGACAACCCACAGAGATATCAGGACACAATACAGAGATGGACAACCCACAGAGATATCAGGACACAATACAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATATCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGGGAAGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATATCCGAACACAAGAAAGAGTTGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGGGAAGGACAACCCA
>TU962273
CAATACAGAGAAGGACAACCCACAGAGATATCCGAACACAATAAAGAGATGGACAACCCACAGAGATATCAGGACACAATAAAGAGATGGACAACCCACAGAGATAGCTAGAATCAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTAGAATCAGAACACAATAAAGAGAAGGACAACCCACAGAGATATCAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGAAGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGAAGGACAACCCACAGAGATATCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGGGAAGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGAGATGGACAACCCACAGAGATATCCGAACACAAGAAAGAGTTGGACAACCCACAGAGATAGCTGGAATTAGAACACAATAAAGGGAAGGACAACCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106572361

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU962272 False 1032 lncRNA 0.41 2 1018772 1019917
TU962273 True 534 lncRNA 0.41 4 1018772 1019917

Neighbor

gene id symbol gene type direction distance location
LOC118966678 NA coding downstream 93416 922355 ~ 925356 (-)
LOC118966679 LOC106594186 coding downstream 96427 916288 ~ 922345 (-)
LOC118966677 NA coding downstream 127504 886116 ~ 891268 (-)
LOC118966676 NA coding downstream 133403 879647 ~ 885369 (-)
LOC110534824 LOC106604036 coding downstream 194909 792950 ~ 823863 (-)
LOC118936903 NA coding upstream 125943 1145860 ~ 1212061 (-)
LOC110533260 LOC106604035 coding upstream 248713 1268630 ~ 1273544 (-)
LOC110518095 LOC106604029 coding upstream 257495 1277329 ~ 1347922 (-)
LOC110533263 NA coding upstream 566581 1586498 ~ 1590637 (-)
LOC110534825 nbea coding upstream 577432 1597349 ~ 1880906 (-)
G844937 NA non-coding downstream 64191 953065 ~ 954581 (-)
G844870 NA non-coding downstream 121610 896953 ~ 897162 (-)
G844865 NA non-coding downstream 124553 880246 ~ 894219 (-)
G844859 LOC106604021 non-coding downstream 148975 866424 ~ 869797 (-)
G844823 NA non-coding downstream 195718 822763 ~ 823054 (-)
G844976 NA non-coding upstream 8223 1028140 ~ 1029996 (-)
G845011 NA non-coding upstream 15337 1035254 ~ 1107144 (-)
G845019 NA non-coding upstream 29236 1049153 ~ 1080774 (-)
G845023 LOC106604038 non-coding upstream 36857 1056774 ~ 1084976 (-)
G845026 LOC106600668 non-coding upstream 42993 1062910 ~ 1067369 (-)
G844866 LOC106591684 other downstream 128014 884160 ~ 890758 (-)
G844847 NA other downstream 172020 844673 ~ 846752 (-)
G844794 NA other downstream 236034 782024 ~ 782738 (-)
G844686 NA other downstream 444834 571525 ~ 573938 (-)
LOC110533226 LOC107554284 other downstream 921077 92131 ~ 97728 (-)
G844975 NA other upstream 5737 1025654 ~ 1027442 (-)
G845133 NA other upstream 214630 1234547 ~ 1235708 (-)
G845570 NA other upstream 630023 1649940 ~ 1651993 (-)

Expression


Co-expression Network