G845275



Basic Information


Item Value
gene id G845275
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 1333587 ~ 1336522 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU962711
acttatacccactcctattcactacttatacccactcctatctACTACTTATACCCactcctattcactacttatacccactcctattcactacttatacccactcctattcacttaTACccactcctatccactacttatacccactcctattcactacttatacccactcctattcactacttatacccactcctattcactactgaTACCCACTCCCATTCACCACTTATACCCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU962711 True 239 lncRNA 0.41 3 1333587 1336522

Neighbor


gene id symbol gene type direction distance location
LOC110533260 LOC106604035 coding downstream 60043 1268630 ~ 1273544 (-)
LOC118936903 NA coding downstream 121526 1145860 ~ 1212061 (-)
LOC118966678 NA coding downstream 408231 922355 ~ 925356 (-)
LOC118966679 LOC106594186 coding downstream 411242 916288 ~ 922345 (-)
LOC118966677 NA coding downstream 442319 886116 ~ 891268 (-)
LOC110533263 NA coding upstream 249976 1586498 ~ 1590637 (-)
LOC110534825 nbea coding upstream 260827 1597349 ~ 1880906 (-)
LOC110534823 NA coding upstream 561351 1897873 ~ 2003474 (-)
LOC110534810 s47a1 coding upstream 791172 2127694 ~ 2171793 (-)
LOC110534809 LOC106590903 coding upstream 859644 2193384 ~ 2217972 (-)
LOC110518095 LOC106604029 non-coding downstream 51425 1277329 ~ 1347922 (-)
G845154 NA non-coding downstream 56517 1276768 ~ 1277070 (-)
G845150 NA non-coding downstream 61447 1270970 ~ 1272140 (-)
G845148 NA non-coding downstream 68528 1264821 ~ 1265059 (-)
G845146 NA non-coding downstream 68887 1264362 ~ 1264700 (-)
G845282 NA non-coding upstream 13285 1349807 ~ 1350061 (-)
G845287 NA non-coding upstream 25561 1362083 ~ 1362891 (-)
G845291 NA non-coding upstream 86263 1422785 ~ 1479651 (-)
G845317 NA non-coding upstream 106958 1443480 ~ 1444676 (-)
G845328 NA non-coding upstream 124677 1461199 ~ 1462021 (-)
G845133 NA other downstream 97879 1234547 ~ 1235708 (-)
G844976 NA other downstream 303591 1028140 ~ 1029996 (-)
G844975 NA other downstream 306145 1025654 ~ 1027442 (-)
G844866 LOC106591684 other downstream 442829 884160 ~ 890758 (-)
G844847 NA other downstream 486835 844673 ~ 846752 (-)
G845570 NA other upstream 313418 1649940 ~ 1651993 (-)
G845683 NA other upstream 630104 1966626 ~ 1967072 (-)
G845769 NA other upstream 756713 2093235 ~ 2098359 (-)
G845814 NA other upstream 819868 2156390 ~ 2157099 (-)

Expression



Co-expression Network