Gene
RNA
| Item | Value |
|---|---|
| gene id | G846506 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 3083215 ~ 3083800 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: probable basic-leucine zipper transcription factor F |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU964323 | True | 399 | lncRNA | 0.39 | 2 | 3083215 | 3083800 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534827 | LOC106604014 | coding | downstream | 3229 | 3071880 ~ 3079986 (-) |
| LOC110533230 | LOC105028657 | coding | downstream | 687219 | 2308544 ~ 2395996 (-) |
| LOC110534809 | LOC106590903 | coding | downstream | 865243 | 2193384 ~ 2217972 (-) |
| LOC110534810 | s47a1 | coding | downstream | 911422 | 2127694 ~ 2171793 (-) |
| LOC110534823 | NA | coding | downstream | 1079741 | 1897873 ~ 2003474 (-) |
| LOC110534828 | NA | coding | upstream | 8735 | 3092535 ~ 3093211 (-) |
| LOC110533269 | LOC104929447 | coding | upstream | 67522 | 3151322 ~ 3153275 (-) |
| LOC110533270 | LOC106604012 | coding | upstream | 105162 | 3188962 ~ 3190885 (-) |
| smyd4 | smyd4 | coding | upstream | 196888 | 3280610 ~ 3307832 (-) |
| LOC110492805 | rtn4rl1 | coding | upstream | 334664 | 3418464 ~ 3577074 (-) |
| G846457 | NA | non-coding | downstream | 20054 | 3058347 ~ 3063161 (-) |
| G846472 | NA | non-coding | downstream | 58283 | 3024339 ~ 3024932 (-) |
| G846465 | NA | non-coding | downstream | 67858 | 3012230 ~ 3015357 (-) |
| G846461 | NA | non-coding | downstream | 73550 | 3007676 ~ 3009665 (-) |
| G846446 | NA | non-coding | downstream | 94125 | 2988647 ~ 2989090 (-) |
| G846547 | NA | non-coding | upstream | 79514 | 3163314 ~ 3163551 (-) |
| G846567 | NA | non-coding | upstream | 179389 | 3263189 ~ 3263538 (-) |
| G846600 | NA | non-coding | upstream | 183949 | 3267749 ~ 3300488 (-) |
| G846614 | NA | non-coding | upstream | 227603 | 3311403 ~ 3311608 (-) |
| G846621 | NA | non-coding | upstream | 237163 | 3320963 ~ 3321194 (-) |
| G846290 | NA | other | downstream | 330112 | 2748953 ~ 2753103 (-) |
| G846125 | LOC106599738 | other | downstream | 439568 | 2643309 ~ 2643647 (-) |
| G845814 | NA | other | downstream | 926116 | 2156390 ~ 2157099 (-) |
| G845769 | NA | other | downstream | 984856 | 2093235 ~ 2098359 (-) |
| G847740 | NA | other | upstream | 1332806 | 4416606 ~ 4419950 (-) |
| G847774 | NA | other | upstream | 1484012 | 4567812 ~ 4569190 (-) |
