G846614



Basic Information


Item Value
gene id G846614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 3311403 ~ 3311608 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU964462
ctgacccattacggatgcaggcaatgaggcagtgatcgctgagatcttggttgaagacagcagaggtgtaatCTAATGAATGTCCTAATATCTAGCTAACAGTGTATTTAGCTTCTTACTTCTGCTTCACATCACTAGCCTCTCTTCCAGCTGTTCCCGTTCCCAACAGGTACACAAGCCTCTCAGCAATAAGCCATTCCTCAAGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU964462 True 206 lncRNA 0.46 1 3311403 3311608

Neighbor


gene id symbol gene type direction distance location
smyd4 smyd4 coding downstream 3571 3280610 ~ 3307832 (-)
LOC110533270 LOC106604012 coding downstream 120518 3188962 ~ 3190885 (-)
LOC110533269 LOC104929447 coding downstream 158128 3151322 ~ 3153275 (-)
LOC110534828 NA coding downstream 218192 3092535 ~ 3093211 (-)
LOC110534827 LOC106604014 coding downstream 231417 3071880 ~ 3079986 (-)
LOC110492805 rtn4rl1 coding upstream 106856 3418464 ~ 3577074 (-)
LOC110491256 LOC106603993 coding upstream 321789 3633397 ~ 3676854 (-)
LOC110491262 NA coding upstream 605038 3916646 ~ 3923466 (-)
LOC110492807 coro6 coding upstream 618590 3930198 ~ 3967363 (-)
LOC110491261 LOC106603981 coding upstream 656602 3968210 ~ 3995755 (-)
G846600 NA non-coding downstream 42108 3267749 ~ 3300488 (-)
G846567 NA non-coding downstream 47865 3263189 ~ 3263538 (-)
G846547 NA non-coding downstream 147852 3163314 ~ 3163551 (-)
G846495 NA non-coding downstream 211727 3052178 ~ 3099676 (-)
G846621 NA non-coding upstream 9355 3320963 ~ 3321194 (-)
G846625 NA non-coding upstream 28619 3340227 ~ 3340454 (-)
G846931 NA non-coding upstream 32230 3343838 ~ 3432780 (-)
G846970 NA non-coding upstream 132909 3444517 ~ 3444744 (-)
G846290 NA other downstream 558300 2748953 ~ 2753103 (-)
G847740 NA other upstream 1104998 4416606 ~ 4419950 (-)
G847774 NA other upstream 1256204 4567812 ~ 4569190 (-)
G847843 NA other upstream 1424921 4736529 ~ 4741588 (-)
G847861 NA other upstream 1499340 4810948 ~ 4812182 (-)
G848149 NA other upstream 1830269 5141877 ~ 5142471 (-)

Expression



Co-expression Network