Gene
RNA
| Item | Value |
|---|---|
| gene id | G847571 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 4062147 ~ 4066219 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106561390 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU965698 | True | 525 | lncRNA | 0.55 | 2 | 4062147 | 4066219 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491261 | LOC106603981 | coding | downstream | 66392 | 3968210 ~ 3995755 (-) |
| LOC110492807 | coro6 | coding | downstream | 94784 | 3930198 ~ 3967363 (-) |
| LOC110491262 | NA | coding | downstream | 138681 | 3916646 ~ 3923466 (-) |
| LOC110491256 | LOC106603993 | coding | downstream | 385293 | 3633397 ~ 3676854 (-) |
| LOC110492805 | rtn4rl1 | coding | downstream | 485073 | 3418464 ~ 3577074 (-) |
| LOC110533247 | LOC105006428 | coding | upstream | 22707 | 4088926 ~ 4107932 (-) |
| cfap300 | LOC106592925 | coding | upstream | 74598 | 4140817 ~ 4148309 (-) |
| LOC110533249 | dlat | coding | upstream | 196560 | 4262779 ~ 4283484 (-) |
| c10h11orf1 | cssa04h11orf1 | coding | upstream | 219866 | 4286085 ~ 4301684 (-) |
| alg9 | alg9 | coding | upstream | 243588 | 4309807 ~ 4363958 (-) |
| G847568 | NA | non-coding | downstream | 678 | 4043851 ~ 4061469 (-) |
| G847557 | NA | non-coding | downstream | 2381 | 4057827 ~ 4059766 (-) |
| G847569 | NA | non-coding | downstream | 13979 | 4044252 ~ 4048168 (-) |
| G847548 | NA | non-coding | downstream | 19590 | 4014524 ~ 4042557 (-) |
| G847248 | NA | non-coding | downstream | 64894 | 3996963 ~ 3997253 (-) |
| G847586 | NA | non-coding | upstream | 39756 | 4105975 ~ 4106301 (-) |
| G847587 | NA | non-coding | upstream | 43658 | 4109877 ~ 4110078 (-) |
| G847588 | NA | non-coding | upstream | 44162 | 4110381 ~ 4110580 (-) |
| G847567 | NA | non-coding | upstream | 70754 | 4136973 ~ 4140751 (-) |
| G847705 | NA | non-coding | upstream | 256418 | 4322637 ~ 4323090 (-) |
| G846600 | NA | other | downstream | 761659 | 3267749 ~ 3300488 (-) |
| smyd4 | smyd4 | other | downstream | 780274 | 3280610 ~ 3307832 (-) |
| LOC110533269 | LOC104929447 | other | downstream | 908924 | 3151322 ~ 3153275 (-) |
| LOC110534827 | LOC106604014 | other | downstream | 984640 | 3071880 ~ 3079986 (-) |
| G846290 | NA | other | downstream | 1309044 | 2748953 ~ 2753103 (-) |
| G847740 | NA | other | upstream | 350387 | 4416606 ~ 4419950 (-) |
| G847774 | NA | other | upstream | 501593 | 4567812 ~ 4569190 (-) |
| G847843 | NA | other | upstream | 670310 | 4736529 ~ 4741588 (-) |
| G847861 | NA | other | upstream | 744729 | 4810948 ~ 4812182 (-) |
| G848149 | NA | other | upstream | 1075658 | 5141877 ~ 5142471 (-) |
