Gene
RNA
| Item | Value |
|---|---|
| gene id | G847587 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 4109877 ~ 4110078 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU965714 | True | 202 | lncRNA | 0.54 | 1 | 4109877 | 4110078 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533247 | LOC105006428 | coding | downstream | 1945 | 4088926 ~ 4107932 (-) |
| LOC110491261 | LOC106603981 | coding | downstream | 114122 | 3968210 ~ 3995755 (-) |
| LOC110492807 | coro6 | coding | downstream | 142514 | 3930198 ~ 3967363 (-) |
| LOC110491262 | NA | coding | downstream | 186411 | 3916646 ~ 3923466 (-) |
| LOC110491256 | LOC106603993 | coding | downstream | 433023 | 3633397 ~ 3676854 (-) |
| cfap300 | LOC106592925 | coding | upstream | 30739 | 4140817 ~ 4148309 (-) |
| LOC110533249 | dlat | coding | upstream | 152701 | 4262779 ~ 4283484 (-) |
| c10h11orf1 | cssa04h11orf1 | coding | upstream | 176007 | 4286085 ~ 4301684 (-) |
| alg9 | alg9 | coding | upstream | 199729 | 4309807 ~ 4363958 (-) |
| kl | kl | coding | upstream | 894868 | 5004946 ~ 5052396 (-) |
| G847586 | NA | non-coding | downstream | 3576 | 4105975 ~ 4106301 (-) |
| G847549 | NA | non-coding | downstream | 5887 | 4004057 ~ 4103990 (-) |
| G847571 | NA | non-coding | downstream | 43658 | 4062147 ~ 4066219 (-) |
| G847568 | NA | non-coding | downstream | 48408 | 4043851 ~ 4061469 (-) |
| G847557 | NA | non-coding | downstream | 50111 | 4057827 ~ 4059766 (-) |
| G847588 | NA | non-coding | upstream | 303 | 4110381 ~ 4110580 (-) |
| G847567 | NA | non-coding | upstream | 26895 | 4136973 ~ 4140751 (-) |
| G847705 | NA | non-coding | upstream | 212559 | 4322637 ~ 4323090 (-) |
| G847700 | mia | non-coding | upstream | 255701 | 4365779 ~ 4381030 (-) |
| G847725 | NA | non-coding | upstream | 276022 | 4386100 ~ 4388424 (-) |
| G846600 | NA | other | downstream | 809389 | 3267749 ~ 3300488 (-) |
| smyd4 | smyd4 | other | downstream | 828004 | 3280610 ~ 3307832 (-) |
| LOC110533269 | LOC104929447 | other | downstream | 956654 | 3151322 ~ 3153275 (-) |
| LOC110534827 | LOC106604014 | other | downstream | 1032370 | 3071880 ~ 3079986 (-) |
| G846290 | NA | other | downstream | 1356774 | 2748953 ~ 2753103 (-) |
| G847740 | NA | other | upstream | 306528 | 4416606 ~ 4419950 (-) |
| G847774 | NA | other | upstream | 457734 | 4567812 ~ 4569190 (-) |
| G847843 | NA | other | upstream | 626451 | 4736529 ~ 4741588 (-) |
| G847861 | NA | other | upstream | 700870 | 4810948 ~ 4812182 (-) |
| G848149 | NA | other | upstream | 1031799 | 5141877 ~ 5142471 (-) |
