G847567


Basic Information

Item Value
gene id G847567
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 4136973 ~ 4140751 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU965693
ccgtccacaactactgtctgactgttccgtccacaactactgtctgactgttccgtctacaactactgtctgactgttccgtctacagctactgtctgactgttccgtctacaactactgtctgactgttccgtctacaactactgtctgactgttccgtctacaactactgactgactgttccGTCTACATCCGTTTacaactactgtctgactgttccgtctacaactactgactgactgttccgtctacaactactgtctgactgttccgtctacaTCCGTTTacaactactgtctgactgttccgtctacaactacAGTCGGACTGTTCCGTTTACAACTACAGTCggactgttccgtctacaactaCTGACGGACTGTTCCGTCGACAACTACTGTCGGACTGTTCCGTCGacaactactgtctgactgtACCGTCTACAGCTTCTGTCGGACTGTTCCGTCTACAGCTTCTGTCGGACTGTTCCGTCTACAGCTTCTGTCggactgttccgtctacaactactgtcggactgttccgtctacaactaCTGTCGGACTGTTCCGTCGacaactactgtctgactgtACCGTCTACAGCTACTGTCGGACTGTTGCATCTACAgctactgtctgactgttccgtctacaactacagtcggactgttccgtctacaactacagtcggactgttccgtctacaactacagtcggactgttccgtctacaactacagtcggactgttccgtctacaactactgtctgactgttccgtctacaGCTACTTTCGGACTTCCGTCTACAGCTACTGTCggactgttccgtctacaacgactgtctgactgttccgtctacaGCTGCTGTCggactgttccgtctacaactGCTGTCGGACTGTTCCGTCCacaactactgtctgactgttccgtccacaactactgtctgactgttccgtctacaactactatctgactgttccgtctacaactactgtctgactgttccgtctacagctactgtctgactgttccgtctacaactaCTATCTGACTGTTCCGTCCACAACTACTGTCTGACTGCTCCGTCTacaactactgtctgactgttccgtctacaactactgtctgactgttccgtctacaactactgactgactgttccgtctacaactactgtctgactgttccgtctacaactactgtctgactgttccgtctacaTCCGTTTACaactactgactgactgttccgtctacaactactgtctgactgttccgtctacaactaCTGT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106592894, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU965693 True 1293 lncRNA 0.49 3 4136973 4140751

Neighbor

gene id symbol gene type direction distance location
LOC110533247 LOC105006428 coding downstream 29041 4088926 ~ 4107932 (-)
LOC110491261 LOC106603981 coding downstream 141218 3968210 ~ 3995755 (-)
LOC110492807 coro6 coding downstream 169610 3930198 ~ 3967363 (-)
LOC110491262 NA coding downstream 213507 3916646 ~ 3923466 (-)
LOC110491256 LOC106603993 coding downstream 460119 3633397 ~ 3676854 (-)
cfap300 LOC106592925 coding upstream 66 4140817 ~ 4148309 (-)
LOC110533249 dlat coding upstream 122028 4262779 ~ 4283484 (-)
c10h11orf1 cssa04h11orf1 coding upstream 145334 4286085 ~ 4301684 (-)
alg9 alg9 coding upstream 169056 4309807 ~ 4363958 (-)
kl kl coding upstream 864195 5004946 ~ 5052396 (-)
G847588 NA non-coding downstream 26393 4110381 ~ 4110580 (-)
G847587 NA non-coding downstream 26895 4109877 ~ 4110078 (-)
G847586 NA non-coding downstream 30672 4105975 ~ 4106301 (-)
G847571 NA non-coding downstream 70754 4062147 ~ 4066219 (-)
G847557 NA non-coding downstream 77207 4057827 ~ 4059766 (-)
G847705 NA non-coding upstream 181886 4322637 ~ 4323090 (-)
G847700 mia non-coding upstream 225028 4365779 ~ 4381030 (-)
G847725 NA non-coding upstream 245349 4386100 ~ 4388424 (-)
G847741 NA non-coding upstream 273429 4414180 ~ 4416442 (-)
G847740 NA non-coding upstream 275855 4416606 ~ 4419950 (-)
G846600 NA other downstream 836485 3267749 ~ 3300488 (-)
smyd4 smyd4 other downstream 855100 3280610 ~ 3307832 (-)
LOC110533269 LOC104929447 other downstream 983750 3151322 ~ 3153275 (-)
LOC110534827 LOC106604014 other downstream 1059466 3071880 ~ 3079986 (-)
G846290 NA other downstream 1383870 2748953 ~ 2753103 (-)
G847774 NA other upstream 427061 4567812 ~ 4569190 (-)
G847843 NA other upstream 595778 4736529 ~ 4741588 (-)
G847861 NA other upstream 670197 4810948 ~ 4812182 (-)
G848149 NA other upstream 1001126 5141877 ~ 5142471 (-)

Expression


Co-expression Network