G847774


Basic Information

Item Value
gene id G847774
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 4567812 ~ 4569190 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU965963
CAGcgagtgaacatttaatggataacagacagcgtctggacagggaaaAACATAGTaacaataatgctgacacggtgaacaaactgaggagcagacagatatagaggggcaatcaacaaagtaatggagtccaggtgagtccaatattgcgCAAATGGACgcaatgatggtgacaggtgtgcataatggtGGGTCACCTGGCGCTAGAGACACACCGATTGTCTGTCACCCTGGTTACCAACCCTAAAACACTTCCAACTGTCTGTCACCATGGTTACCCACTGTAGAACACCATCCACTGTCTATCATCATGGTTACCAACTGTAGAACACCTCCCACCCTGTCTGTCACCATGGTCCTtaaacctagaacacctcccacTGTCCTTCAACATGGTTACCAACTGTAGAACACCACCCATCCTGTCTGTCACCATGGTTACCAACCCTGAACTCCTCCCAGAGCATCATCTACAAACTCAGTAGTGCATCCATCTTAAGATGGCTAGGTGGGACATCCAGGCATAGGATGTCATTTCAGCGCTAGAaaggggagggatggggggggttAGTGAGCACTGTATgtgaagagaagaggggagaaaaggagagaggaggggagaagagaggagaactgaGAGGAGAACTGAGAGGAGAACTAAGAGGAGAACTGAGAGgagaactgagaggagaggagaagaagaagtggGGGGGGCTGATGACCCTTTCCTTTCacagtctctcccctctctcttgttcTTGCTCTTATTCAGTCCTTAGTGTCTGTCCAAGGTAGTATGTTTTCATGACAAGAGGAGAAGTTCTTACATGGGTCTcttcaaaagtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtcctctgcaGATTCAACGTAGAGCAacactcttctcccctcttctccctcccatctcctcccaccttcctccctctctcccttttctagACAAAAGCTTCAGGTTTGCTGGACCCGTTGATCTTGAGGTATATCTTGGAGTCCTGGTCTCTATCCTGTATCTGGCGGTGCAGTGTGCGTCTGAAACACACCAGGTACAGAGGCAGCAGGAAGCCCAGCATACTGACCCCCAACAGGCCTACATTCAC
>TU965964
CAGcgagtgaacatttaatggataacagacagcgtctggacagggaaaAACATAGTaacaataatgctgacacggtgaacaaactgaggagcagacagatatagaggggcaatcaacaaagtaatggagtccaggtgagtccaatattgcgCAAATGGACgcaatgatggtgacaggtgtgcataatggtGGGTCACCTGGCGCTAGAGACACACCGATTGTCTGTCACCATGGTTACCAACTGTAGAACACCTCCCACCCTGTCTGTCACCATGGTCCTtaaacctagaacacctcccacTGTCCTTCAACATGGTTACCAACTGTAGAACACCACCCATCCTGTCTGTCACCATGGTTACCAACCCTGAACTCCTCCCAGAGCATCATCTACAAACTCAGTAGTGCATCCATCTTAAGATGGCTAGGTGGGACATCCAGGCATAGGATGTCATTTCAGCGCTAGAaaggggagggatggggggggttAGTGAGCACTGTATgtgaagagaagaggggagaaaaggagagaggaggggagaagagaggagaactgaGAGGAGAACTGAGAGGAGAACTAAGAGGAGAACTGAGAGgagaactgagaggagaggagaagaagaagtggGGGGGGCTGATGACCCTTTCCTTTCacagtctctcccctctctcttgttcTTGCTCTTATTCAGTCCTTAGTGTCTGTCCAAGGTAGTATGTTTTCATGACAAGAGGAGAAGTTCTTACATGGGTCTcttcaaaagtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtgtgtgtgggcgtgtgtagatatctgtgtgtatgtgtgtgtcctctgcaGATTCAACGTAGAGCAacactcttctcccctcttctccctcccatctcctcccaccttcctccctctctcccttttctagACAAAAGCTTCAGGTTTGCTGGACCCGTTGATCTTGAGGTATATCTTGGAGTCCTGGTCTCTATCCTGTATCTGGCGGTGCAGTGTGCGTCTGAAACACACCAGGTACAGAGGCAGCAGGAAGCCCAGCATACTGACCCCCAACAGGCCTACATTCAC

Function

NR:

description
large neutral amino acids transporter small subunit 4-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU965963 False 1253 TUCP 0.49 2 4567812 4569190
TU965964 True 1173 TUCP 0.49 2 4567812 4569190

Neighbor

gene id symbol gene type direction distance location
alg9 alg9 coding downstream 203854 4309807 ~ 4363958 (-)
c10h11orf1 cssa04h11orf1 coding downstream 266128 4286085 ~ 4301684 (-)
LOC110533249 dlat coding downstream 284328 4262779 ~ 4283484 (-)
cfap300 LOC106592925 coding downstream 419503 4140817 ~ 4148309 (-)
LOC110533247 LOC105006428 coding downstream 459880 4088926 ~ 4107932 (-)
kl kl coding upstream 435756 5004946 ~ 5052396 (-)
LOC110533265 rxfp2 coding upstream 575314 5144504 ~ 5280794 (-)
LOC110533267 LOC106604000 coding upstream 889541 5458731 ~ 5479247 (-)
LOC110534826 LOC106604001 coding upstream 913005 5482195 ~ 5499373 (-)
LOC110534831 LOC106594356 coding upstream 1086148 5655338 ~ 5661550 (-)
G847798 NA non-coding downstream 5353 4561884 ~ 4562459 (-)
G847778 NA non-coding downstream 36989 4530398 ~ 4530823 (-)
G847765 NA non-coding downstream 47418 4470343 ~ 4520394 (-)
G847759 LOC106591715 non-coding downstream 122499 4442065 ~ 4445313 (-)
G847740 NA non-coding downstream 149415 4416606 ~ 4419950 (-)
G847804 NA non-coding upstream 6467 4575657 ~ 4577143 (-)
G847806 NA non-coding upstream 13533 4582723 ~ 4586129 (-)
G847844 NA non-coding upstream 177239 4746429 ~ 4746693 (-)
G847853 NA non-coding upstream 218708 4787898 ~ 4789069 (-)
G847864 NA non-coding upstream 245704 4814894 ~ 4815198 (-)
G846600 NA other downstream 1267324 3267749 ~ 3300488 (-)
smyd4 smyd4 other downstream 1285939 3280610 ~ 3307832 (-)
LOC110533269 LOC104929447 other downstream 1414589 3151322 ~ 3153275 (-)
LOC110534827 LOC106604014 other downstream 1490305 3071880 ~ 3079986 (-)
G847843 NA other upstream 167339 4736529 ~ 4741588 (-)
G847861 NA other upstream 241758 4810948 ~ 4812182 (-)
G848149 NA other upstream 572687 5141877 ~ 5142471 (-)
LOC118966693 NA other upstream 1150457 5715285 ~ 5724923 (-)
G848524 LOC106591845 other upstream 1170694 5739884 ~ 5822028 (-)

Expression

G847774 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 40.
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G847774 Expression in each Bioproject

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G847774 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network