Gene
RNA
| Item | Value |
|---|---|
| gene id | G848024 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 5019333 ~ 5020958 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU966252 | False | 220 | lncRNA | 0.41 | 2 | 5019333 | 5020958 |
| TU966253 | True | 220 | lncRNA | 0.42 | 2 | 5020507 | 5020958 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| alg9 | alg9 | coding | downstream | 655375 | 4309807 ~ 4363958 (-) |
| c10h11orf1 | cssa04h11orf1 | coding | downstream | 717649 | 4286085 ~ 4301684 (-) |
| LOC110533249 | dlat | coding | downstream | 735849 | 4262779 ~ 4283484 (-) |
| cfap300 | LOC106592925 | coding | downstream | 871024 | 4140817 ~ 4148309 (-) |
| LOC110533247 | LOC105006428 | coding | downstream | 911401 | 4088926 ~ 4107932 (-) |
| LOC110533265 | rxfp2 | coding | upstream | 123546 | 5144504 ~ 5280794 (-) |
| LOC110533267 | LOC106604000 | coding | upstream | 437773 | 5458731 ~ 5479247 (-) |
| LOC110534826 | LOC106604001 | coding | upstream | 461237 | 5482195 ~ 5499373 (-) |
| LOC110534831 | LOC106594356 | coding | upstream | 634380 | 5655338 ~ 5661550 (-) |
| LOC118936911 | LOC106597397 | coding | upstream | 640808 | 5661766 ~ 5664814 (-) |
| G848014 | NA | non-coding | downstream | 39893 | 4979150 ~ 4979440 (-) |
| G848012 | NA | non-coding | downstream | 40931 | 4978188 ~ 4978402 (-) |
| G848009 | NA | non-coding | downstream | 48568 | 4970466 ~ 4970765 (-) |
| G848002 | NA | non-coding | downstream | 68111 | 4950596 ~ 4951222 (-) |
| G848000 | NA | non-coding | downstream | 72234 | 4932862 ~ 4947099 (-) |
| G848030 | NA | non-coding | upstream | 20814 | 5041772 ~ 5042292 (-) |
| G848041 | NA | non-coding | upstream | 65929 | 5086887 ~ 5087534 (-) |
| G848055 | NA | non-coding | upstream | 113377 | 5134335 ~ 5135671 (-) |
| G848147 | NA | non-coding | upstream | 122368 | 5143326 ~ 5143661 (-) |
| G848224 | NA | non-coding | upstream | 296883 | 5317841 ~ 5318045 (-) |
| G847861 | NA | other | downstream | 207151 | 4810948 ~ 4812182 (-) |
| G847843 | NA | other | downstream | 277745 | 4736529 ~ 4741588 (-) |
| G847774 | NA | other | downstream | 450143 | 4567812 ~ 4569190 (-) |
| G847740 | NA | other | downstream | 599383 | 4416606 ~ 4419950 (-) |
| smyd4 | smyd4 | other | downstream | 1737460 | 3280610 ~ 3307832 (-) |
| G848149 | NA | other | upstream | 120919 | 5141877 ~ 5142471 (-) |
| LOC118966693 | NA | other | upstream | 698689 | 5715285 ~ 5724923 (-) |
| G848524 | LOC106591845 | other | upstream | 718926 | 5739884 ~ 5822028 (-) |
| G849438 | hpd | other | upstream | 1760665 | 6778916 ~ 6787520 (-) |
| G849536 | NA | other | upstream | 1993773 | 7014731 ~ 7015222 (-) |
