G848030


Basic Information

Item Value
gene id G848030
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 5041772 ~ 5042292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU966259
gTTTGTTGTGGGGCCAGGGTAGAACATGCAAAAGTTAGGTTGGCCAAGCACCAGTCTAAAGTCCCAAGGTGGAATGAACATGGAGGATTATAATGACAGTACTGAGGGTTAGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTAGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTAGATTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTGGAGTATTATAATGAGGGTTAGAGTATTATAATTAGGGTTAGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTGGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTAGATTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTGGAGTATTATAATGAGGGTTAGAGTATTATAATGAGGGTTAGATTATTATAATGAGGGTTAGAGTATTATAA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU966259 True 501 lncRNA 0.33 2 5041772 5042292

Neighbor

gene id symbol gene type direction distance location
alg9 alg9 coding downstream 677814 4309807 ~ 4363958 (-)
c10h11orf1 cssa04h11orf1 coding downstream 740088 4286085 ~ 4301684 (-)
LOC110533249 dlat coding downstream 758288 4262779 ~ 4283484 (-)
cfap300 LOC106592925 coding downstream 893463 4140817 ~ 4148309 (-)
LOC110533247 LOC105006428 coding downstream 933840 4088926 ~ 4107932 (-)
LOC110533265 rxfp2 coding upstream 102212 5144504 ~ 5280794 (-)
LOC110533267 LOC106604000 coding upstream 416439 5458731 ~ 5479247 (-)
LOC110534826 LOC106604001 coding upstream 439903 5482195 ~ 5499373 (-)
LOC110534831 LOC106594356 coding upstream 613046 5655338 ~ 5661550 (-)
LOC118936911 LOC106597397 coding upstream 619474 5661766 ~ 5664814 (-)
G848024 NA non-coding downstream 20814 5019333 ~ 5020958 (-)
G848014 NA non-coding downstream 62332 4979150 ~ 4979440 (-)
G848012 NA non-coding downstream 63370 4978188 ~ 4978402 (-)
G848009 NA non-coding downstream 71007 4970466 ~ 4970765 (-)
G848002 NA non-coding downstream 90550 4950596 ~ 4951222 (-)
G848041 NA non-coding upstream 44595 5086887 ~ 5087534 (-)
G848055 NA non-coding upstream 92043 5134335 ~ 5135671 (-)
G848147 NA non-coding upstream 101034 5143326 ~ 5143661 (-)
G848224 NA non-coding upstream 275549 5317841 ~ 5318045 (-)
G848312 NA non-coding upstream 371998 5414290 ~ 5418343 (-)
G847861 NA other downstream 229590 4810948 ~ 4812182 (-)
G847843 NA other downstream 300184 4736529 ~ 4741588 (-)
G847774 NA other downstream 472582 4567812 ~ 4569190 (-)
G847740 NA other downstream 621822 4416606 ~ 4419950 (-)
smyd4 smyd4 other downstream 1759899 3280610 ~ 3307832 (-)
G848149 NA other upstream 99585 5141877 ~ 5142471 (-)
LOC118966693 NA other upstream 677355 5715285 ~ 5724923 (-)
G848524 LOC106591845 other upstream 697592 5739884 ~ 5822028 (-)
G849438 hpd other upstream 1739331 6778916 ~ 6787520 (-)
G849536 NA other upstream 1972439 7014731 ~ 7015222 (-)

Expression


Co-expression Network