Gene
RNA
| Item | Value |
|---|---|
| gene id | G848344 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 5492888 ~ 5493234 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU966663 | True | 263 | lncRNA | 0.43 | 2 | 5492888 | 5493234 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533267 | LOC106604000 | coding | downstream | 13641 | 5458731 ~ 5479247 (-) |
| LOC110533265 | rxfp2 | coding | downstream | 212094 | 5144504 ~ 5280794 (-) |
| kl | kl | coding | downstream | 440492 | 5004946 ~ 5052396 (-) |
| alg9 | alg9 | coding | downstream | 1128930 | 4309807 ~ 4363958 (-) |
| c10h11orf1 | cssa04h11orf1 | coding | downstream | 1191204 | 4286085 ~ 4301684 (-) |
| LOC110534831 | LOC106594356 | coding | upstream | 162104 | 5655338 ~ 5661550 (-) |
| LOC118936911 | LOC106597397 | coding | upstream | 168532 | 5661766 ~ 5664814 (-) |
| LOC118936905 | LOC106603981 | coding | upstream | 171916 | 5665150 ~ 5704712 (-) |
| LOC110533273 | LOC106591344 | coding | upstream | 213556 | 5706790 ~ 5714323 (-) |
| LOC118966693 | NA | coding | upstream | 222051 | 5715285 ~ 5724923 (-) |
| G848333 | NA | non-coding | downstream | 15692 | 5469833 ~ 5477196 (-) |
| G848304 | NA | non-coding | downstream | 30996 | 5461067 ~ 5461892 (-) |
| G848328 | NA | non-coding | downstream | 34845 | 5456224 ~ 5458043 (-) |
| G848318 | NA | non-coding | downstream | 64529 | 5427815 ~ 5428359 (-) |
| G848312 | NA | non-coding | downstream | 74545 | 5414290 ~ 5418343 (-) |
| G848302 | hmgb1 | non-coding | upstream | 13999 | 5507233 ~ 5515519 (-) |
| G848503 | NA | non-coding | upstream | 122814 | 5616048 ~ 5648580 (-) |
| G848508 | NA | non-coding | upstream | 124963 | 5618197 ~ 5622484 (-) |
| G848547 | NA | non-coding | upstream | 194805 | 5688039 ~ 5688368 (-) |
| G848548 | NA | non-coding | upstream | 195769 | 5689003 ~ 5689207 (-) |
| G848149 | NA | other | downstream | 350417 | 5141877 ~ 5142471 (-) |
| G847861 | NA | other | downstream | 680706 | 4810948 ~ 4812182 (-) |
| G847843 | NA | other | downstream | 751300 | 4736529 ~ 4741588 (-) |
| G847774 | NA | other | downstream | 923698 | 4567812 ~ 4569190 (-) |
| G847740 | NA | other | downstream | 1072938 | 4416606 ~ 4419950 (-) |
| G848524 | LOC106591845 | other | upstream | 246650 | 5739884 ~ 5822028 (-) |
| G849438 | hpd | other | upstream | 1288389 | 6778916 ~ 6787520 (-) |
| G849536 | NA | other | upstream | 1521497 | 7014731 ~ 7015222 (-) |
| LOC110533297 | LOC106603951 | other | upstream | 1587357 | 7080591 ~ 7308250 (-) |
