Gene
RNA
| Item | Value |
|---|---|
| gene id | G848689 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 5998821 ~ 5999151 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU967064 | True | 331 | lncRNA | 0.37 | 1 | 5998821 | 5999151 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pitx1 | pitx1 | coding | downstream | 27819 | 5960237 ~ 5971002 (-) |
| LOC118937089 | NA | coding | downstream | 130723 | 5868024 ~ 5868098 (-) |
| LOC118937090 | NA | coding | downstream | 131031 | 5867715 ~ 5867790 (-) |
| LOC118937091 | NA | coding | downstream | 131502 | 5867245 ~ 5867319 (-) |
| LOC118937088 | NA | coding | downstream | 131784 | 5866959 ~ 5867037 (-) |
| LOC110533286 | LOC106603967 | coding | upstream | 153533 | 6152684 ~ 6176005 (-) |
| larp1 | LOC106603968 | coding | upstream | 199371 | 6198522 ~ 6256673 (-) |
| sap30l | LOC106603970 | coding | upstream | 353646 | 6352797 ~ 6361051 (-) |
| LOC110533288 | ggnbp2 | coding | upstream | 362741 | 6361892 ~ 6376512 (-) |
| pigw | pigw | coding | upstream | 380436 | 6379587 ~ 6382385 (-) |
| G848686 | NA | non-coding | downstream | 1968 | 5996593 ~ 5996853 (-) |
| G848685 | NA | non-coding | downstream | 2832 | 5995669 ~ 5995989 (-) |
| G848682 | NA | non-coding | downstream | 5051 | 5993250 ~ 5993770 (-) |
| G848675 | NA | non-coding | downstream | 13808 | 5984800 ~ 5985013 (-) |
| G848664 | NA | non-coding | downstream | 39292 | 5959204 ~ 5959529 (-) |
| G848721 | NA | non-coding | upstream | 33406 | 6032557 ~ 6033003 (-) |
| G848744 | NA | non-coding | upstream | 61829 | 6060980 ~ 6061394 (-) |
| G848766 | NA | non-coding | upstream | 77851 | 6077002 ~ 6077286 (-) |
| G848775 | NA | non-coding | upstream | 95363 | 6094514 ~ 6094794 (-) |
| G848776 | NA | non-coding | upstream | 96063 | 6095214 ~ 6096390 (-) |
| G848524 | LOC106591845 | other | downstream | 176793 | 5739884 ~ 5822028 (-) |
| LOC118966693 | NA | other | downstream | 274011 | 5715285 ~ 5724923 (-) |
| G848149 | NA | other | downstream | 856350 | 5141877 ~ 5142471 (-) |
| G847861 | NA | other | downstream | 1186639 | 4810948 ~ 4812182 (-) |
| G847843 | NA | other | downstream | 1257233 | 4736529 ~ 4741588 (-) |
| G849438 | hpd | other | upstream | 782472 | 6778916 ~ 6787520 (-) |
| G849536 | NA | other | upstream | 1015580 | 7014731 ~ 7015222 (-) |
| LOC110533297 | LOC106603951 | other | upstream | 1081440 | 7080591 ~ 7308250 (-) |
| G849864 | LOC106603950 | other | upstream | 1441752 | 7400883 ~ 7443617 (-) |
| G850323 | NA | other | upstream | 1742151 | 7741302 ~ 7746624 (-) |
