Gene
RNA
| Item | Value |
|---|---|
| gene id | G849084 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 6527325 ~ 6558756 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU967533 | False | 225 | lncRNA | 0.52 | 3 | 6527325 | 6558756 |
| TU967534 | False | 225 | lncRNA | 0.52 | 3 | 6529810 | 6558756 |
| TU967535 | True | 240 | lncRNA | 0.52 | 2 | 6556050 | 6558756 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533291 | LOC106603975 | coding | downstream | 69657 | 6429933 ~ 6457668 (-) |
| LOC110533295 | LOC105008281 | coding | downstream | 122989 | 6403217 ~ 6404336 (-) |
| znhit3 | znhit3 | coding | downstream | 125906 | 6399723 ~ 6401419 (-) |
| pigw | pigw | coding | downstream | 144940 | 6379587 ~ 6382385 (-) |
| LOC110533288 | ggnbp2 | coding | downstream | 150813 | 6361892 ~ 6376512 (-) |
| LOC110534837 | LOC106603953 | coding | upstream | 65507 | 6624263 ~ 6640847 (-) |
| LOC110519104 | mtmr4 | coding | upstream | 92571 | 6651327 ~ 6763741 (-) |
| LOC118966698 | rnf43 | coding | upstream | 250245 | 6809001 ~ 7034472 (-) |
| LOC118966699 | NA | coding | upstream | 444203 | 7002865 ~ 7006459 (-) |
| LOC118966700 | NA | coding | upstream | 449164 | 7007920 ~ 7014182 (-) |
| G849082 | NA | non-coding | downstream | 6253 | 6520834 ~ 6521072 (-) |
| G849079 | NA | non-coding | downstream | 15652 | 6502954 ~ 6511673 (-) |
| G849075 | NA | non-coding | downstream | 28730 | 6492930 ~ 6498595 (-) |
| G849074 | NA | non-coding | downstream | 36774 | 6490279 ~ 6490551 (-) |
| G849073 | NA | non-coding | downstream | 40597 | 6486517 ~ 6486728 (-) |
| G849349 | NA | non-coding | upstream | 19383 | 6578139 ~ 6578353 (-) |
| G849350 | NA | non-coding | upstream | 20282 | 6579038 ~ 6579650 (-) |
| G849360 | NA | non-coding | upstream | 34566 | 6593322 ~ 6594011 (-) |
| G849385 | NA | non-coding | upstream | 57212 | 6615968 ~ 6616659 (-) |
| G849389 | NA | non-coding | upstream | 62742 | 6621498 ~ 6621717 (-) |
| G848524 | LOC106591845 | other | downstream | 705297 | 5739884 ~ 5822028 (-) |
| LOC118966693 | NA | other | downstream | 802515 | 5715285 ~ 5724923 (-) |
| G848149 | NA | other | downstream | 1384854 | 5141877 ~ 5142471 (-) |
| G847861 | NA | other | downstream | 1715143 | 4810948 ~ 4812182 (-) |
| G847843 | NA | other | downstream | 1785737 | 4736529 ~ 4741588 (-) |
| G849438 | hpd | other | upstream | 222867 | 6778916 ~ 6787520 (-) |
| G849536 | NA | other | upstream | 455975 | 7014731 ~ 7015222 (-) |
| LOC110533297 | LOC106603951 | other | upstream | 521835 | 7080591 ~ 7308250 (-) |
| G849864 | LOC106603950 | other | upstream | 882147 | 7400883 ~ 7443617 (-) |
| G850323 | NA | other | upstream | 1182546 | 7741302 ~ 7746624 (-) |
