G849369


Basic Information

Item Value
gene id G849369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 6711570 ~ 6712282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU967868
agacacacacactcacacacacacacacacacacacacacacacacacacacacacactgaaacacacacacacacacacacacacacactgaaacacacacacacacacactgaaacacacacacacacacacacacacacactgaaacacacacacacacacacacacactgaaacacacacacacacacactgaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgaaacacacacacacacacacactgaaacacacacacacacacacacacacacacactgaaacacacacacacacactgaaacacacacacacactgaaacacacacacacactgaaacacacacacactgaaacacacacacactgaaacactgaaacacacacagtaaaacgtCTCCCACTTTGCTTTACAGACCTGATAGTGACACCGACGAACAAGCCTTCAGCTTTGTTCCAGCCGGAGGAAAATGGGACCTCTACTCGTGATTCGATGTCATTTAGACACTCTGTAAAACCTCCCTCACACCTCACAGATGTTCCTCAGCTGTCGCCTCTCTCCACTTTAATAAAAACACCAACAGAGGCATAATTTGTCACCGTCACTATGAAATCATTCTCAGTAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU967868 True 687 lncRNA 0.46 2 6711570 6712282

Neighbor

gene id symbol gene type direction distance location
LOC110534837 LOC106603953 coding downstream 70723 6624263 ~ 6640847 (-)
LOC110533291 LOC106603975 coding downstream 253902 6429933 ~ 6457668 (-)
LOC110533295 LOC105008281 coding downstream 307234 6403217 ~ 6404336 (-)
znhit3 znhit3 coding downstream 310151 6399723 ~ 6401419 (-)
pigw pigw coding downstream 329185 6379587 ~ 6382385 (-)
LOC118966698 rnf43 coding upstream 96719 6809001 ~ 7034472 (-)
LOC118966699 NA coding upstream 290677 7002865 ~ 7006459 (-)
LOC118966700 NA coding upstream 295638 7007920 ~ 7014182 (-)
LOC118966702 NA coding upstream 297158 7009440 ~ 7011035 (-)
hsf5 LOC106603959 coding upstream 323916 7036198 ~ 7041922 (-)
G849406 NA non-coding downstream 10343 6699282 ~ 6701227 (-)
G849375 NA non-coding downstream 21237 6689560 ~ 6690333 (-)
G849404 NA non-coding downstream 27051 6682937 ~ 6684519 (-)
G849368 NA non-coding downstream 61132 6648774 ~ 6650438 (-)
G849412 NA non-coding upstream 18895 6731177 ~ 6731867 (-)
G849438 hpd non-coding upstream 66634 6778916 ~ 6787520 (-)
G849444 NA non-coding upstream 98880 6811162 ~ 6811931 (-)
G849452 NA non-coding upstream 114618 6826900 ~ 6869391 (-)
G849422 NA non-coding upstream 116304 6828586 ~ 6833642 (-)
G848524 LOC106591845 other downstream 889542 5739884 ~ 5822028 (-)
LOC118966693 NA other downstream 986760 5715285 ~ 5724923 (-)
G848149 NA other downstream 1569099 5141877 ~ 5142471 (-)
G847861 NA other downstream 1899388 4810948 ~ 4812182 (-)
G847843 NA other downstream 1969982 4736529 ~ 4741588 (-)
G849536 NA other upstream 302449 7014731 ~ 7015222 (-)
LOC110533297 LOC106603951 other upstream 368309 7080591 ~ 7308250 (-)
G849864 LOC106603950 other upstream 728621 7400883 ~ 7443617 (-)
G850323 NA other upstream 1029020 7741302 ~ 7746624 (-)

Expression


Co-expression Network