XLOC_002772


Basic Information

Item Value
gene id XLOC_002772
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24613973 ~ 24627438 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006047
GTTTGTTGTCAAGGATGCCAATAAAGAGTTATAAATCAGCGGCGGCGTTTTAACATAACTGATCTGGCCAATCAGATCAAAGAAGGCGGGGCTTTAAACCTGACAGAAACAAAACTTAATTAATTTCCAAAGGCGGGAAAAAGATGCTTTAATTATAACGGTCGACAGTGTGAGGAAACATCAAAAAGACTCCTCTTAGCATCTGCACCAGAGTAGCAAAAATGGAAAGTCAACAATGGCAGATGTCAGACCTGCTCCTGGTGCTGTGTGTGGAGCTCCTCCACTTCTGACTGATGCTCTGCTCTCAGATGATCTCTGTCTGAAGCGTGTCGTAACCTCAGCTTCTCCTCTAAGGTGGCCAGTTCAGAATTCTGCTGCACCTGTAACTCTCTGAGCTCCTTCTCGAAGCACTCCTCCAGCTCTCGCTTCTCCTTCTGAAGATGCTCCCAGCGGGCTGCGTTAAAGGCTGAGGAACAGAGTTCGaattaaaataagacaaaactAGATTGTAGATAACCTGGTGATACAACCATAAACCTCACTGAACTCACCCACTTCATGCTGAATCCGACTAAGTTCCTCTGACAGCTCTCTTTCCTTCTGCTCAGCACTTTCACTctgaaacattcacacacacatgcttttgtttaaatattttatggtaaatgcaacacaggcttattgtgaacacgtacccctgtatacagtTCTGGAGAGCAAATTATAGCCAGAGCTatgaatggctgcattttgtctttaaaatgaacgctatggtgTGATATGACGCCGCCGACAGCTTCTGTTTCTATTCGCAGTACTGACTGacagcttacctccgtgtggacagcTTTTCAGATGTTAGgctaccagtttgcccagtggcttggtgtgtacatttatttacagtaattttttaagTTTAAGAATTAAATACACAATTTATCTTCTAACCGTACCCCAAAACCAAACCAGATATATTATCCTAATCACTTtactgtttataaatatgtatCATCATTAgatatattttctgtcttttatattaatattcatgCTTTATTTAGTCACTATTAATTTCATTTCTCATGGTTGGTTTTTAAACTGT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006047 True 1105 lncRNA 0.41 3 24613973 24627438

Neighbor

gene id symbol gene type direction distance location
XLOC_002771 AL929315.2 coding downstream 158241 24455616 ~ 24455732 (-)
XLOC_002770 AL929315.1 coding downstream 167981 24439620 ~ 24445992 (-)
XLOC_002769 hephl1b coding downstream 197502 24394023 ~ 24416471 (-)
XLOC_002767 slc43a2b coding downstream 222257 24371921 ~ 24391716 (-)
XLOC_002768 CU467963.2 coding downstream 230592 24383266 ~ 24383381 (-)
XLOC_002773 stoml3b coding upstream 13791 24641229 ~ 24648231 (-)
XLOC_002774 proser1 coding upstream 21465 24648903 ~ 24659840 (-)
XLOC_002775 si:ch211-287a12.9 coding upstream 54869 24682307 ~ 24689725 (-)
XLOC_002776 smpd1 coding upstream 82529 24709967 ~ 24759616 (-)
XLOC_002777 timm10b coding upstream 134778 24762216 ~ 24765988 (-)
XLOC_002764 NA non-coding downstream 564768 23780542 ~ 24049205 (-)
XLOC_002763 NA non-coding downstream 1064091 23548976 ~ 23549882 (-)
XLOC_002779 NA non-coding upstream 206258 24833696 ~ 24852525 (-)
XLOC_002788 NA non-coding upstream 753560 25380998 ~ 25390673 (-)
XLOC_002790 NA non-coding upstream 866735 25494173 ~ 25499474 (-)
XLOC_002792 NA non-coding upstream 1059463 25686901 ~ 25687218 (-)
XLOC_002793 NA non-coding upstream 1063434 25690872 ~ 25691670 (-)

Expression


Co-expression Network