G850348


Basic Information

Item Value
gene id G850348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 7800219 ~ 7802044 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU969087
CTATCAGTCACACACCAACAACTTCTTCCACACACCATATAACCATATAACCCCCAATtttccctaactcctaactcctaactcctaaccctaactcctaactcctaacccctaactcctaaacctaactcctaaacctaactcctaaacctaactcctaactcctaaatcctaaacctaactcctaaacctaactcctaaacctaactcctaaacctaactcctaactcctaaacctaactcctaactcctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaccctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaacctaactcctaaccctaaacctaactcctgaccctaaacctaactcctaaccctaaacctaactcctaaccctaaacctaactcctaaatcctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaacctaactcctaaacctaactcctaaccctaaacctaactcctaaatcctaaacctaactcctaaccctaaacctaactcctaaacctaactcctaaacctaactcctaactccctcCCCATGTGGGatcattttccttgttttactatccttgtggggccttttggggattttaggtccccacacGGATAGATTAACaaacccagacacacacaaacacacacacaccgtccccCTCTGAGAGCAGGAAAACCAGTCACCTGGAGCTGCCAATTGCGTTGCCATAGTATCACAATCCAGGGACAATATCTTACAGTACGTTTctatctgtgtctttctctctgttttccatctaattctctgtctttctctctattttcCATCtaattctctgtctttctctctgtgttccatctaattctctctttctctctgttttccatctaattctctgtctttctctctgttttccaTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU969087 True 1177 lncRNA 0.41 4 7800219 7802044

Neighbor

gene id symbol gene type direction distance location
dhx33 dhx33 coding downstream 75184 7660924 ~ 7725035 (-)
LOC110533307 LOC106603944 coding downstream 106647 7684889 ~ 7693572 (-)
LOC110533309 NA coding downstream 117391 7674779 ~ 7682828 (-)
LOC110533304 LOC106603946 coding downstream 129441 7481614 ~ 7670778 (-)
LOC100136697 LOC100136697 coding downstream 330280 7457304 ~ 7469939 (-)
LOC110534844 atp2a3 coding upstream 179304 7981348 ~ 8092260 (-)
ankfy1 LOC106603930 coding upstream 399591 8201635 ~ 8239974 (-)
LOC110533316 LOC106603929 coding upstream 438428 8240472 ~ 8254020 (-)
tmsb NA coding upstream 508773 8310644 ~ 8315310 (-)
LOC118936913 NA coding upstream 619308 8421352 ~ 8424233 (-)
G850304 NA non-coding downstream 12877 7786185 ~ 7787342 (-)
G850305 NA non-coding downstream 15617 7783432 ~ 7784602 (-)
G850281 NA non-coding downstream 99794 7699630 ~ 7700425 (-)
G850266 NA non-coding downstream 160469 7636722 ~ 7639750 (-)
G850360 NA non-coding upstream 29538 7831582 ~ 7832153 (-)
G850362 NA non-coding upstream 31480 7833524 ~ 7833950 (-)
G850390 NA non-coding upstream 84978 7887022 ~ 7887365 (-)
G850425 NA non-coding upstream 127532 7929576 ~ 7930082 (-)
G850428 NA non-coding upstream 133232 7935276 ~ 7935880 (-)
G850323 NA other downstream 53595 7741302 ~ 7746624 (-)
G849864 LOC106603950 other downstream 356602 7400883 ~ 7443617 (-)
LOC110533297 LOC106603951 other downstream 667654 7080591 ~ 7308250 (-)
G849536 NA other downstream 784997 7014731 ~ 7015222 (-)
G849438 hpd other downstream 1012699 6778916 ~ 6787520 (-)
G850763 NA other upstream 629487 8431531 ~ 8432041 (-)
G852802 NA other upstream 2660212 10462256 ~ 10462650 (-)
G853244 NA other upstream 3203065 11005109 ~ 11005658 (-)
G853740 NA other upstream 3640208 11442252 ~ 11442590 (-)
LOC110533345 LOC106603865 other upstream 3779642 11567493 ~ 11583280 (-)

Expression


Co-expression Network