G850662



Basic Information


Item Value
gene id G850662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 8321446 ~ 8322165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU969456
CTCAGTCAGAGTCTCAACCTACTGTTgagagtaagaatagtagaatacgtaAGGTtgtgtcaagtcactgacagtcactcaattagtcaTGTCAGCTAAAATGTCttagattggtagttagtctagccagctatctaaacttgtagtaatcatggctgaaTACTGACTGTGCATGCAGGACATGtggcccaggggccctgacctccaggtggCCCCCCAATTGATTGTGTTACTCATTGGCATGAGTCAGGACAAAATGTCTAAagttgcaggaaattagctttaaaactgtaaacatttctctccaccccatgtcaaaatgggtagaattacaggaaatgaaCTTGAAAACTTATCTCCAGCGTCAAGAGGGggtcactaaaatgttttgccgtGAAGTGGACCCAACAACCCCATCACAGTATGTAGGGTACTACACTAATATTCTGTttgtattcctcatcatgtccgctctgtctccattctcactgtctggtctgaatgaaatattctacCTTTTAACAGATGTGGGATGCTGTGGCAGTTTCAGCTTTAAGGAAtcaacagacaacagacaaccgACAACAGACAACAGACTACCGACAACCGACAACAGACAATAGTCAACAGACAATAGACAATAGTCAATAGACAATAGTCAACAGACAatagacaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU969456 True 676 lncRNA 0.42 2 8321446 8322165

Neighbor


gene id symbol gene type direction distance location
tmsb NA coding downstream 6184 8310644 ~ 8315310 (-)
LOC110533316 LOC106603929 coding downstream 67426 8240472 ~ 8254020 (-)
ankfy1 LOC106603930 coding downstream 81472 8201635 ~ 8239974 (-)
LOC110534844 atp2a3 coding downstream 229186 7981348 ~ 8092260 (-)
LOC118966703 LOC106603934 coding downstream 428291 7793602 ~ 7893155 (-)
LOC118936913 NA coding upstream 99187 8421352 ~ 8424233 (-)
nipal4 LOC106603923 coding upstream 307136 8629301 ~ 8635959 (-)
LOC100136703 LOC106603941 coding upstream 315508 8637673 ~ 8638902 (-)
mat2b mat2b coding upstream 883490 9205655 ~ 9210660 (-)
eif4ebp3 4ebp coding upstream 895297 9217462 ~ 9222353 (-)
G850661 NA non-coding downstream 109 8321057 ~ 8321337 (-)
G850660 NA non-coding downstream 2595 8318626 ~ 8318851 (-)
G850656 NA non-coding downstream 14750 8305916 ~ 8306696 (-)
G850654 NA non-coding downstream 24006 8297239 ~ 8297440 (-)
G850663 NA non-coding upstream 343 8322508 ~ 8322978 (-)
G850664 NA non-coding upstream 3248 8325413 ~ 8325695 (-)
G850665 NA non-coding upstream 5219 8327384 ~ 8327595 (-)
G850670 NA non-coding upstream 14772 8336937 ~ 8339896 (-)
G850675 NA non-coding upstream 29464 8351629 ~ 8351935 (-)
G850323 NA other downstream 574822 7741302 ~ 7746624 (-)
G849864 LOC106603950 other downstream 877829 7400883 ~ 7443617 (-)
LOC110533297 LOC106603951 other downstream 1188881 7080591 ~ 7308250 (-)
G849536 NA other downstream 1306224 7014731 ~ 7015222 (-)
G849438 hpd other downstream 1533926 6778916 ~ 6787520 (-)
G850763 NA other upstream 109366 8431531 ~ 8432041 (-)
G852802 NA other upstream 2140091 10462256 ~ 10462650 (-)
G853244 NA other upstream 2682944 11005109 ~ 11005658 (-)
G853740 NA other upstream 3120087 11442252 ~ 11442590 (-)
LOC110533345 LOC106603865 other upstream 3259521 11567493 ~ 11583280 (-)

Expression



Co-expression Network