Gene
RNA
| Item | Value |
|---|---|
| gene id | G850717 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 8385373 ~ 8385743 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU969529 | True | 371 | lncRNA | 0.55 | 1 | 8385373 | 8385743 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmsb | NA | coding | downstream | 70111 | 8310644 ~ 8315310 (-) |
| LOC110533316 | LOC106603929 | coding | downstream | 131353 | 8240472 ~ 8254020 (-) |
| ankfy1 | LOC106603930 | coding | downstream | 145399 | 8201635 ~ 8239974 (-) |
| LOC110534844 | atp2a3 | coding | downstream | 293113 | 7981348 ~ 8092260 (-) |
| LOC118966703 | LOC106603934 | coding | downstream | 492218 | 7793602 ~ 7893155 (-) |
| LOC118936913 | NA | coding | upstream | 35609 | 8421352 ~ 8424233 (-) |
| nipal4 | LOC106603923 | coding | upstream | 243558 | 8629301 ~ 8635959 (-) |
| LOC100136703 | LOC106603941 | coding | upstream | 251930 | 8637673 ~ 8638902 (-) |
| mat2b | mat2b | coding | upstream | 819912 | 9205655 ~ 9210660 (-) |
| eif4ebp3 | 4ebp | coding | upstream | 831719 | 9217462 ~ 9222353 (-) |
| G850675 | NA | non-coding | downstream | 33438 | 8351629 ~ 8351935 (-) |
| G850670 | NA | non-coding | downstream | 45477 | 8336937 ~ 8339896 (-) |
| G850665 | NA | non-coding | downstream | 57778 | 8327384 ~ 8327595 (-) |
| G850664 | NA | non-coding | downstream | 59678 | 8325413 ~ 8325695 (-) |
| G850663 | NA | non-coding | downstream | 62395 | 8322508 ~ 8322978 (-) |
| G850802 | NA | non-coding | upstream | 80300 | 8466043 ~ 8466285 (-) |
| G850817 | NA | non-coding | upstream | 94910 | 8480653 ~ 8481111 (-) |
| G850820 | NA | non-coding | upstream | 99360 | 8485103 ~ 8485978 (-) |
| G850975 | NA | non-coding | upstream | 203623 | 8589366 ~ 8590066 (-) |
| G850973 | NA | non-coding | upstream | 208850 | 8594593 ~ 8597959 (-) |
| G850323 | NA | other | downstream | 638749 | 7741302 ~ 7746624 (-) |
| G849864 | LOC106603950 | other | downstream | 941756 | 7400883 ~ 7443617 (-) |
| LOC110533297 | LOC106603951 | other | downstream | 1252808 | 7080591 ~ 7308250 (-) |
| G849536 | NA | other | downstream | 1370151 | 7014731 ~ 7015222 (-) |
| G849438 | hpd | other | downstream | 1597853 | 6778916 ~ 6787520 (-) |
| G850763 | NA | other | upstream | 45788 | 8431531 ~ 8432041 (-) |
| G852802 | NA | other | upstream | 2076513 | 10462256 ~ 10462650 (-) |
| G853244 | NA | other | upstream | 2619366 | 11005109 ~ 11005658 (-) |
| G853740 | NA | other | upstream | 3056509 | 11442252 ~ 11442590 (-) |
| LOC110533345 | LOC106603865 | other | upstream | 3195943 | 11567493 ~ 11583280 (-) |
