G852209


Basic Information

Item Value
gene id G852209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 9833955 ~ 9834364 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU971316
atgtagtcatgttacctgggttaccagagagttctatgtagtcatgttacctgggttaccagagagttctatgtagtcatgttacctgggttaccagagagttccatgtagtcatgttacctgggttaccagagagttccatgtagtcatgttacctgggttaccagagagttccatgtagtcatgttacctgggttaccagagaggtccatgtagtcatgttacctgggttaccagagagttccatgtagtcatgtcacctgggttaccagagagttccatgtagtcatgttacctgggttaccagagagttccatgtagtcatggctctatttaatcctgtgcgtttcccagcctctgttctggacctggggactgtgaagacacTGGTTGCATGTCCTGTGTTGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU971316 True 410 lncRNA 0.47 1 9833955 9834364

Neighbor

gene id symbol gene type direction distance location
afap1l1b LOC106603893 coding downstream 9946 9786628 ~ 9824009 (-)
grpel2 LOC106603896 coding downstream 48092 9774555 ~ 9785863 (-)
nhp2 LOC106603897 coding downstream 79538 9752443 ~ 9754417 (-)
LOC110533396 LOC106603900 coding downstream 129459 9699947 ~ 9704496 (-)
slbp2 LOC106603940 coding downstream 139404 9691209 ~ 9694551 (-)
LOC110533312 LOC106603939 coding upstream 124313 9958677 ~ 9966932 (-)
LOC110533324 LOC106603889 coding upstream 312547 10146911 ~ 10155242 (-)
LOC118936914 NA coding upstream 713207 10547571 ~ 10549301 (-)
LOC118966706 NA coding upstream 873178 10707542 ~ 10709076 (-)
LOC110533330 LOC106603879 coding upstream 926318 10760682 ~ 10849833 (-)
G852205 NA non-coding downstream 4011 9829727 ~ 9829944 (-)
G852203 NA non-coding downstream 7420 9826173 ~ 9826535 (-)
G852202 NA non-coding downstream 8146 9825390 ~ 9825809 (-)
G852198 NA non-coding downstream 20803 9812365 ~ 9813152 (-)
G852192 NA non-coding downstream 28945 9804304 ~ 9805010 (-)
G852244 NA non-coding upstream 98520 9932884 ~ 9934052 (-)
G852245 NA non-coding upstream 101211 9935575 ~ 9935985 (-)
G852255 NA non-coding upstream 115100 9949464 ~ 9949684 (-)
G852283 NA non-coding upstream 140846 9975210 ~ 9975442 (-)
G850763 NA other downstream 1401914 8431531 ~ 8432041 (-)
G850323 NA other downstream 2087331 7741302 ~ 7746624 (-)
G849864 LOC106603950 other downstream 2390338 7400883 ~ 7443617 (-)
LOC110533297 LOC106603951 other downstream 2701390 7080591 ~ 7308250 (-)
G849536 NA other downstream 2818733 7014731 ~ 7015222 (-)
G852802 NA other upstream 627892 10462256 ~ 10462650 (-)
G853244 NA other upstream 1170745 11005109 ~ 11005658 (-)
G853740 NA other upstream 1607888 11442252 ~ 11442590 (-)
LOC110533345 LOC106603865 other upstream 1747322 11567493 ~ 11583280 (-)
G854016 LOC106603864 other upstream 1780892 11615256 ~ 11620922 (-)

Expression


Co-expression Network