G853086


Basic Information

Item Value
gene id G853086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 10671316 ~ 10672012 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU972298
cttgtaagtaagcatttcacagtgaggtctacactgttggttaagggcttgtaagtaagcatttcacagtgaggtctacactgttggttaagggcttgtaagtaagcatttcacagtgaggtctacactgttggttaaggtcttgtaagtaagcatttcacagtgaggtctacactgttggttaaaggcttgtaagtaaagcatttcacagtgaggtctacactgttggttaaggtcttgtaagtaagcatttcacagtgaggtctacactgttggttaagggcttgtcagtaagcatttcacagtgaggtctacacttgtattcggcgcatgtgacaaataaagtttgctTTGACTAGATGACCAATCTCAAAGCCCCTCCCATCCAGCTATGATCTTGAGTCCCAGACAGCTAGTATTCATCAATCCATGATGACCATGGGTTCTCCTCCTCACTTATGGGAGGGGCAATATACCCAAACATACATCTAGCCTAAATGCATATTCTGCCAGACATGTGAAAAAACACCAGTTCTCACCAAAAATACCATTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU972298 True 556 lncRNA 0.42 3 10671316 10672012

Neighbor

gene id symbol gene type direction distance location
LOC118936914 NA coding downstream 122015 10547571 ~ 10549301 (-)
LOC110533324 LOC106603889 coding downstream 516074 10146911 ~ 10155242 (-)
LOC110533312 LOC106603939 coding downstream 704384 9958677 ~ 9966932 (-)
LOC110534842 LOC106603895 coding downstream 729735 9819544 ~ 9941581 (-)
afap1l1b LOC106603893 coding downstream 847307 9786628 ~ 9824009 (-)
LOC118966706 NA coding upstream 35530 10707542 ~ 10709076 (-)
LOC110533330 LOC106603879 coding upstream 88670 10760682 ~ 10849833 (-)
LOC110533336 LOC106603872 coding upstream 316777 10988789 ~ 10993793 (-)
bod1 LOC106603873 coding upstream 354075 11026087 ~ 11029511 (-)
LOC118936915 NA coding upstream 418009 11090021 ~ 11091274 (-)
G853085 NA non-coding downstream 2110 10669007 ~ 10669206 (-)
G853083 NA non-coding downstream 4296 10666327 ~ 10667020 (-)
G852890 NA non-coding downstream 57186 10613872 ~ 10614130 (-)
G852888 NA non-coding downstream 57897 10612916 ~ 10613419 (-)
G852857 NA non-coding downstream 87681 10583219 ~ 10583635 (-)
G853138 NA non-coding upstream 73134 10745146 ~ 10746016 (-)
G853161 NA non-coding upstream 144461 10816473 ~ 10817431 (-)
G853179 NA non-coding upstream 191939 10863951 ~ 10864293 (-)
G853202 NA non-coding upstream 232599 10904611 ~ 10905031 (-)
G853222 NA non-coding upstream 291264 10963276 ~ 10963581 (-)
G852802 NA other downstream 208666 10462256 ~ 10462650 (-)
G850763 NA other downstream 2239275 8431531 ~ 8432041 (-)
G850323 NA other downstream 2924692 7741302 ~ 7746624 (-)
G849864 LOC106603950 other downstream 3227699 7400883 ~ 7443617 (-)
LOC110533297 LOC106603951 other downstream 3538751 7080591 ~ 7308250 (-)
G853244 NA other upstream 333097 11005109 ~ 11005658 (-)
G853740 NA other upstream 770240 11442252 ~ 11442590 (-)
LOC110533345 LOC106603865 other upstream 909674 11567493 ~ 11583280 (-)
G854016 LOC106603864 other upstream 943244 11615256 ~ 11620922 (-)
G854402 NA other upstream 1113108 11785120 ~ 11785853 (-)

Expression


Co-expression Network