G855079 (sept8)


Basic Information

Item Value
gene id G855079
gene name sept8
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 12581393 ~ 12611178 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU974511
ATTCATGGAGGAGTTGATCTCTGTGACTGCGTGGTCATCTGTGGGGAACTGATAGATCTGGACTCCGTTGCTCACCAGCTCACTCATGATTTTAATCTTGAATTTATGGAGCTCGCTCTTGGAGATTGTATCGGCTTTAGCGATGATGGGGATTATATTACCTTGCTGTCCAGTTTCTTCATGGTAACTAAATCCAAAGACTTCAGCGAATGCCCCGTGGGAGCAATGAAGTACAGACAGATGTGGACCCTCCCGTCGTGGTAGTTGAAGAGGGAGCGCTTGATTTTCAGCTCTTCCTGGAGGTACTTTTCAAACTGTGTGTCGATATAGTCCACTATCGGTTTATaaCTCTCCTCTTTGTTGATCTGGTCCCCGAACCCCACAGTGTCCACAATAGTCAGCTTGAGGTGGACGTTGCTCTCCTGGAGGTCATATGTTCTGGGCCGCATACACACGCCATTCTGGTAGTGGCTGGCCTCCTCGTTCTCAAACATTGTGTTAAAAAGCGTATTCATTAACGTCGACTTGCCAATACCCGTTTCCCCTACACAGAGGATATTGAAGCAGAAACCCTGTGTCACCGATTTACTGACCAACTGATCGGGAAGGCTGTCAAAACCAACATGGCCACCCAAACTGAGATTACGCTTTTCTTCATTAGAAAATATGTCTACGTCCGTAGCAGCCATGGTGCGAAATGTATGCGTTTTAATGCCGATCTGGGCGAAAGGAAACTGCccttgtctcactctctctgtaaaCTAGCTGACACAGTGGAACAAGCTTGATTGCGCTTCCAATATGGCTACTTCCTGGAAACTCCCATTTGCCTTCGGAGCTACACAATCCAGAAGGACAGGACTGCGCGC

Function

NR:

description
septin-8-A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU974511 True 869 TUCP 0.48 5 12581393 12611178
Loading

Neighbor

gene id symbol gene type direction distance location
sowahab LOC106603849 coding downstream 170 12578268 ~ 12581223 (-)
LOC110533353 LOC106603853 coding downstream 98048 12472950 ~ 12483345 (-)
LOC110533352 rnf14 coding downstream 111136 12448219 ~ 12470257 (-)
LOC118936498 LOC106567496 coding downstream 140795 12434692 ~ 12440598 (-)
nfip1 nfip1 coding downstream 150314 12405834 ~ 12431079 (-)
LOC110533359 LOC106567503 coding upstream 12832 12624010 ~ 12628431 (-)
LOC110533360 LOC106603848 coding upstream 373795 12984973 ~ 13056679 (-)
gabra1 LOC106567505 coding upstream 486202 13097380 ~ 13126840 (-)
LOC110533362 LOC106603847 coding upstream 529116 13140294 ~ 13161952 (-)
LOC110533364 LOC106603843 coding upstream 957870 13569048 ~ 13627424 (-)
G855046 NA non-coding downstream 48024 12533076 ~ 12533369 (-)
G854978 NA non-coding downstream 50178 12530890 ~ 12531215 (-)
G855044 NA non-coding downstream 50575 12530316 ~ 12530818 (-)
G855040 NA non-coding downstream 64282 12516708 ~ 12517111 (-)
G855039 NA non-coding downstream 65010 12515961 ~ 12516383 (-)
G855123 NA non-coding upstream 35607 12646785 ~ 12647928 (-)
G855130 NA non-coding upstream 45799 12656977 ~ 12657179 (-)
G855136 NA non-coding upstream 50649 12661827 ~ 12662168 (-)
G855138 NA non-coding upstream 51644 12662822 ~ 12663203 (-)
G854734 golga7b other downstream 286857 12294103 ~ 12294536 (-)
G854402 NA other downstream 795540 11785120 ~ 11785853 (-)
G854016 LOC106603864 other downstream 960471 11615256 ~ 11620922 (-)
LOC110533345 LOC106603865 other downstream 998205 11567493 ~ 11583280 (-)
G853740 NA other downstream 1138803 11442252 ~ 11442590 (-)
G856922 NA other upstream 1573109 14184287 ~ 14184974 (-)
G856863 LOC106603829 other upstream 1592355 14203533 ~ 14210382 (-)
G856872 NA other upstream 1594094 14205272 ~ 14207216 (-)
LOC110533380 LOC106603823 other upstream 1960782 14557109 ~ 14794250 (-)
G858015 NA other upstream 2506244 15117422 ~ 15118029 (-)

Expression

G855079(sept8) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.2.
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G855079(sept8) Expression in each Bioproject

Bar chart with 11 bars.
G855079(sept8) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
End of interactive chart.

Co-expression Network