Gene
RNA
| Item | Value |
|---|---|
| gene id | G856002 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 13488625 ~ 13489139 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU975542 | False | 460 | lncRNA | 0.40 | 2 | 13488625 | 13489139 |
| TU975545 | True | 460 | lncRNA | 0.40 | 2 | 13488625 | 13489139 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533363 | LOC106603846 | coding | upstream | 221225 | 13175263 ~ 13267400 (+) |
| LOC110533358 | sept8 | coding | upstream | 860181 | 12581314 ~ 12628444 (+) |
| LOC110533356 | LOC106603850 | coding | upstream | 916874 | 12530904 ~ 12571751 (+) |
| LOC110533355 | LOC106603851 | coding | upstream | 963570 | 12498973 ~ 12525055 (+) |
| zcchc10 | zcchc10 | coding | upstream | 991347 | 12485809 ~ 12497278 (+) |
| sh3pxd2b | LOC106603845 | coding | downstream | 24292 | 13513431 ~ 13568699 (+) |
| LOC110534850 | LOC106603841 | coding | downstream | 147895 | 13637034 ~ 13736817 (+) |
| LOC110533370 | pdli4 | coding | downstream | 436663 | 13925802 ~ 13970129 (+) |
| LOC110533371 | LOC106603835 | coding | downstream | 553553 | 14042692 ~ 14053189 (+) |
| slc22a5 | LOC106603832 | coding | downstream | 579274 | 14068413 ~ 14077286 (+) |
| G855986 | NA | non-coding | upstream | 14490 | 13414303 ~ 13474135 (+) |
| G855995 | NA | non-coding | upstream | 35100 | 13434693 ~ 13453525 (+) |
| G855624 | NA | non-coding | upstream | 318743 | 13169579 ~ 13169882 (+) |
| G855620 | NA | non-coding | upstream | 323753 | 13164673 ~ 13164872 (+) |
| G855587 | NA | non-coding | upstream | 344697 | 13086809 ~ 13143928 (+) |
| G856090 | NA | non-coding | downstream | 7072 | 13496211 ~ 13496420 (+) |
| G856092 | NA | non-coding | downstream | 8836 | 13497975 ~ 13498233 (+) |
| G856116 | NA | non-coding | downstream | 47639 | 13536778 ~ 13537002 (+) |
| G856119 | NA | non-coding | downstream | 53033 | 13542172 ~ 13542411 (+) |
| G856278 | NA | non-coding | downstream | 212725 | 13701864 ~ 13703954 (+) |
| G855498 | NA | other | upstream | 467593 | 13016534 ~ 13021032 (+) |
| G855483 | LOC106603848 | other | upstream | 498783 | 12985031 ~ 12989842 (+) |
| G853577 | NA | other | upstream | 2172285 | 11315950 ~ 11316340 (+) |
| G853516 | NA | other | upstream | 2220989 | 11267374 ~ 11267636 (+) |
| G856353 | NA | other | downstream | 284748 | 13773887 ~ 13774582 (+) |
| tcf7 | skp1 | other | downstream | 1577829 | 15066890 ~ 15138685 (+) |
| G858148 | NA | other | downstream | 1925301 | 15414440 ~ 15434748 (+) |
| G858203 | NA | other | downstream | 2037250 | 15526389 ~ 15526807 (+) |
| G858416 | NA | other | downstream | 2384890 | 15874029 ~ 15878692 (+) |
