Gene
RNA
| Item | Value |
|---|---|
| gene id | G856119 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 13542172 ~ 13542411 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU975669 | True | 240 | lncRNA | 0.44 | 1 | 13542172 | 13542411 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533363 | LOC106603846 | coding | upstream | 274772 | 13175263 ~ 13267400 (+) |
| LOC110533358 | sept8 | coding | upstream | 913728 | 12581314 ~ 12628444 (+) |
| LOC110533356 | LOC106603850 | coding | upstream | 970421 | 12530904 ~ 12571751 (+) |
| LOC110533355 | LOC106603851 | coding | upstream | 1017117 | 12498973 ~ 12525055 (+) |
| zcchc10 | zcchc10 | coding | upstream | 1044894 | 12485809 ~ 12497278 (+) |
| LOC110534850 | LOC106603841 | coding | downstream | 94623 | 13637034 ~ 13736817 (+) |
| LOC110533370 | pdli4 | coding | downstream | 383391 | 13925802 ~ 13970129 (+) |
| LOC110533371 | LOC106603835 | coding | downstream | 500281 | 14042692 ~ 14053189 (+) |
| slc22a5 | LOC106603832 | coding | downstream | 526002 | 14068413 ~ 14077286 (+) |
| LOC110533374 | LOC106603831 | coding | downstream | 550542 | 14092953 ~ 14099097 (+) |
| G856116 | NA | non-coding | upstream | 5170 | 13536778 ~ 13537002 (+) |
| G856092 | NA | non-coding | upstream | 43939 | 13497975 ~ 13498233 (+) |
| G856090 | NA | non-coding | upstream | 45752 | 13496211 ~ 13496420 (+) |
| G856002 | NA | non-coding | upstream | 53033 | 13488625 ~ 13489139 (+) |
| G855986 | NA | non-coding | upstream | 68037 | 13414303 ~ 13474135 (+) |
| G856278 | NA | non-coding | downstream | 159453 | 13701864 ~ 13703954 (+) |
| G856280 | NA | non-coding | downstream | 171251 | 13713662 ~ 13719526 (+) |
| G856342 | NA | non-coding | downstream | 214755 | 13757166 ~ 13758666 (+) |
| G856350 | dpyl3 | non-coding | downstream | 229525 | 13771936 ~ 13788429 (+) |
| G856363 | NA | non-coding | downstream | 259142 | 13801553 ~ 13801755 (+) |
| G855498 | NA | other | upstream | 521140 | 13016534 ~ 13021032 (+) |
| G855483 | LOC106603848 | other | upstream | 552330 | 12985031 ~ 12989842 (+) |
| G853577 | NA | other | upstream | 2225832 | 11315950 ~ 11316340 (+) |
| G853516 | NA | other | upstream | 2274536 | 11267374 ~ 11267636 (+) |
| G856353 | NA | other | downstream | 231476 | 13773887 ~ 13774582 (+) |
| tcf7 | skp1 | other | downstream | 1524557 | 15066890 ~ 15138685 (+) |
| G858148 | NA | other | downstream | 1872029 | 15414440 ~ 15434748 (+) |
| G858203 | NA | other | downstream | 1983978 | 15526389 ~ 15526807 (+) |
| G858416 | NA | other | downstream | 2331618 | 15874029 ~ 15878692 (+) |
