G857123


Basic Information

Item Value
gene id G857123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 14461491 ~ 14461779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU976815
TGTTGCTGAAAGGCAGCCAGATACAGATAACCTAGCTAATGGCATCAGGTAGCTACAAACAAGGGATGTGACAATCGGACAGTTTCACTTAACGTTTAAACTGCATTTTATTTGATTGGTTTACCATTAAAACGCTAAGAGAAAATCAACAGTAGAGTTCTGTTCTGGCATAATGTTCTGTATTGTTCCCTTAGCAACAGTAATAGTCTCTGATTGATGTGCTGCTGTGTTATTTTGTATGCTGTTTTTTATGGTATGGTAGCTAGATGTGTTTTATTTCTACTAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU976815 True 289 lncRNA 0.36 1 14461491 14461779

Neighbor

gene id symbol gene type direction distance location
LOC110533377 LOC106603825 coding upstream 31205 14279497 ~ 14430286 (+)
LOC110533378 LOC106603820 coding upstream 186293 14224203 ~ 14275198 (+)
LOC118936695 LOC106603828 coding upstream 237444 14216996 ~ 14224047 (+)
LOC110533375 LOC106603829 coding upstream 251064 14115152 ~ 14210427 (+)
LOC110533374 LOC106603831 coding upstream 362394 14092953 ~ 14099097 (+)
tcf7 skp1 coding downstream 605111 15066890 ~ 15138685 (+)
ube2b ube2b coding downstream 709535 15171314 ~ 15185905 (+)
LOC110534855 LOC106603811 coding downstream 746397 15208176 ~ 15482337 (+)
LOC110533411 LOC106603809 coding downstream 1037854 15499633 ~ 15523339 (+)
LOC110533412 NA coding downstream 1081991 15543770 ~ 15607192 (+)
G856654 irf1-2 non-coding upstream 311346 14148165 ~ 14150145 (+)
G856659 NA non-coding upstream 347636 14113572 ~ 14113855 (+)
G856689 NA non-coding upstream 370139 14090970 ~ 14091352 (+)
G856686 NA non-coding upstream 377435 14083791 ~ 14084056 (+)
G857148 NA non-coding downstream 17361 14479140 ~ 14479580 (+)
G857156 NA non-coding downstream 23123 14484902 ~ 14485175 (+)
G857168 NA non-coding downstream 36688 14498467 ~ 14498690 (+)
G857169 NA non-coding downstream 37005 14498784 ~ 14499043 (+)
G857212 NA non-coding downstream 100218 14561997 ~ 14562201 (+)
G856353 NA other upstream 686909 13773887 ~ 13774582 (+)
G855498 NA other upstream 1440459 13016534 ~ 13021032 (+)
G855483 LOC106603848 other upstream 1471649 12985031 ~ 12989842 (+)
zcchc10 zcchc10 other upstream 1965236 12485809 ~ 12497278 (+)
G853577 NA other upstream 3145151 11315950 ~ 11316340 (+)
G858148 NA other downstream 952661 15414440 ~ 15434748 (+)
G858203 NA other downstream 1064610 15526389 ~ 15526807 (+)
G858416 NA other downstream 1412250 15874029 ~ 15878692 (+)
G860453 NA other downstream 2640136 17101915 ~ 17102467 (+)

Expression


Co-expression Network