G857716


Basic Information

Item Value
gene id G857716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 14907867 ~ 14908169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU977421
ttgtgatacagcctggattctaaccagtgtctgtagtgacacctctagcactgagatgcagtgccttaaacagctgcttcactcgggagcccaagtaTTAGTACTGTGGAGTGACTgcaatgttgttaatccatcctcagttttctcctatcacagctattaaactttgtaactgttttaaagtcaccattggcctcatggtgaaatccctgagcgttctttcctctccggcaactgagttaggaaggacgcctgtcaGAGCaaagccccaaaaattgtcaaagaccccagtcacccaagtca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106611174

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU977421 True 303 lncRNA 0.46 1 14907867 14908169

Neighbor

gene id symbol gene type direction distance location
LOC110533377 LOC106603825 coding upstream 477581 14279497 ~ 14430286 (+)
LOC110533378 LOC106603820 coding upstream 632669 14224203 ~ 14275198 (+)
LOC118936695 LOC106603828 coding upstream 683820 14216996 ~ 14224047 (+)
LOC110533375 LOC106603829 coding upstream 697440 14115152 ~ 14210427 (+)
LOC110533374 LOC106603831 coding upstream 808770 14092953 ~ 14099097 (+)
tcf7 skp1 coding downstream 158721 15066890 ~ 15138685 (+)
ube2b ube2b coding downstream 263145 15171314 ~ 15185905 (+)
LOC110534855 LOC106603811 coding downstream 300007 15208176 ~ 15482337 (+)
LOC110533411 LOC106603809 coding downstream 591464 15499633 ~ 15523339 (+)
LOC110533412 NA coding downstream 635601 15543770 ~ 15607192 (+)
G857706 NA non-coding upstream 6639 14900993 ~ 14901228 (+)
G857215 NA non-coding upstream 338376 14569232 ~ 14569491 (+)
G857212 NA non-coding upstream 345666 14561997 ~ 14562201 (+)
G857169 NA non-coding upstream 408824 14498784 ~ 14499043 (+)
G857168 NA non-coding upstream 409177 14498467 ~ 14498690 (+)
G857746 NA non-coding downstream 23701 14931870 ~ 14932280 (+)
G857748 NA non-coding downstream 24787 14932956 ~ 14933312 (+)
G857752 NA non-coding downstream 26470 14934639 ~ 14934878 (+)
G857789 NA non-coding downstream 70971 14979140 ~ 14980151 (+)
G857801 NA non-coding downstream 86423 14994592 ~ 14995000 (+)
G856353 NA other upstream 1133285 13773887 ~ 13774582 (+)
G855498 NA other upstream 1886835 13016534 ~ 13021032 (+)
G855483 LOC106603848 other upstream 1918025 12985031 ~ 12989842 (+)
zcchc10 zcchc10 other upstream 2411612 12485809 ~ 12497278 (+)
G853577 NA other upstream 3591527 11315950 ~ 11316340 (+)
G858148 NA other downstream 506271 15414440 ~ 15434748 (+)
G858203 NA other downstream 618220 15526389 ~ 15526807 (+)
G858416 NA other downstream 965860 15874029 ~ 15878692 (+)
G860453 NA other downstream 2193746 17101915 ~ 17102467 (+)

Expression


Co-expression Network