G857869


Basic Information

Item Value
gene id G857869
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 15121156 ~ 15121529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU977583
ggatgaattggaaagacGACTACGAGCCatgcctaatcacccaacatcagtgcccaacctcactaatgctcttgtggctgaatggaagcaagtccccacagcaatgttccaacatctagtggaaagctttcccagaagagtggaggctgttatagcagcaaagtggggaaCAACTCCACATactgaaaataagtatttaatgAAACATAGAGTATCTACCAGCGCTTCCTAGTTTTTTTTCTGAGAGTGACTAGAGCTCCATCTGCTGGCATTGAGTGATACTGCTCACAGTCCTACTGCCCTGAGAGGACTGTCTGGAAGCCTATGCTTAAAGGGCCAACAAACCACCCTGGTGCTTCAGCGCTTCATGGCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU977583 True 374 lncRNA 0.47 1 15121156 15121529

Neighbor

gene id symbol gene type direction distance location
LOC110533377 LOC106603825 coding upstream 690870 14279497 ~ 14430286 (+)
LOC110533378 LOC106603820 coding upstream 845958 14224203 ~ 14275198 (+)
LOC118936695 LOC106603828 coding upstream 897109 14216996 ~ 14224047 (+)
LOC110533375 LOC106603829 coding upstream 910729 14115152 ~ 14210427 (+)
LOC110533374 LOC106603831 coding upstream 1022059 14092953 ~ 14099097 (+)
ube2b ube2b coding downstream 49785 15171314 ~ 15185905 (+)
LOC110534855 LOC106603811 coding downstream 86647 15208176 ~ 15482337 (+)
LOC110533411 LOC106603809 coding downstream 378104 15499633 ~ 15523339 (+)
LOC110533412 NA coding downstream 422241 15543770 ~ 15607192 (+)
sytl2a sytl2 coding downstream 494180 15615709 ~ 15662249 (+)
G857868 NA non-coding upstream 1283 15118975 ~ 15119873 (+)
G857865 NA non-coding upstream 7424 15113240 ~ 15113732 (+)
G857822 NA non-coding upstream 93576 15027341 ~ 15027580 (+)
G857820 NA non-coding upstream 95135 15025740 ~ 15026021 (+)
G857802 NA non-coding upstream 125017 14995740 ~ 14996139 (+)
tcf7 skp1 non-coding downstream 7497 15066890 ~ 15138685 (+)
G857880 LOC106567527 non-coding downstream 21892 15143421 ~ 15143730 (+)
G858052 NA non-coding downstream 80594 15202123 ~ 15202354 (+)
G858073 NA non-coding downstream 105395 15226924 ~ 15227652 (+)
G858078 NA non-coding downstream 112039 15233568 ~ 15234698 (+)
G856353 NA other upstream 1346574 13773887 ~ 13774582 (+)
G855498 NA other upstream 2100124 13016534 ~ 13021032 (+)
G855483 LOC106603848 other upstream 2131314 12985031 ~ 12989842 (+)
zcchc10 zcchc10 other upstream 2624901 12485809 ~ 12497278 (+)
G858148 NA other downstream 292911 15414440 ~ 15434748 (+)
G858203 NA other downstream 404860 15526389 ~ 15526807 (+)
G858416 NA other downstream 752500 15874029 ~ 15878692 (+)
G860453 NA other downstream 1980386 17101915 ~ 17102467 (+)
G860570 NA other downstream 2204711 17326240 ~ 17326929 (+)

Expression


Co-expression Network