G858190


Basic Information

Item Value
gene id G858190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 15486614 ~ 15486946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU977961
tttccaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgtcaccttttgctgtgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgagggtggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU977961 True 333 lncRNA 0.41 1 15486614 15486946

Neighbor

gene id symbol gene type direction distance location
LOC110534855 LOC106603811 coding upstream 4396 15208176 ~ 15482337 (+)
ube2b ube2b coding upstream 300709 15171314 ~ 15185905 (+)
tcf7 skp1 coding upstream 356704 15066890 ~ 15138685 (+)
LOC110533377 LOC106603825 coding upstream 1056328 14279497 ~ 14430286 (+)
LOC110533378 LOC106603820 coding upstream 1211416 14224203 ~ 14275198 (+)
LOC110533411 LOC106603809 coding downstream 12687 15499633 ~ 15523339 (+)
LOC110533412 NA coding downstream 56824 15543770 ~ 15607192 (+)
sytl2a sytl2 coding downstream 128763 15615709 ~ 15662249 (+)
LOC110533414 LOC106603806 coding downstream 176539 15663485 ~ 15666551 (+)
LOC110533415 LOC106603804 coding downstream 194266 15681212 ~ 15993975 (+)
G858183 NA non-coding upstream 4727 15481431 ~ 15481887 (+)
G858148 NA non-coding upstream 61114 15414440 ~ 15434748 (+)
G858149 NA non-coding upstream 65821 15419255 ~ 15420793 (+)
G858062 NA non-coding upstream 77286 15407864 ~ 15409328 (+)
G858193 NA non-coding downstream 1204 15488150 ~ 15488398 (+)
G858194 NA non-coding downstream 1703 15488649 ~ 15489008 (+)
G858195 NA non-coding downstream 2176 15489122 ~ 15489354 (+)
G858196 NA non-coding downstream 2570 15489516 ~ 15489971 (+)
G858204 NA non-coding downstream 39922 15526868 ~ 15527084 (+)
G856353 NA other upstream 1712032 13773887 ~ 13774582 (+)
G855498 NA other upstream 2465582 13016534 ~ 13021032 (+)
G855483 LOC106603848 other upstream 2496772 12985031 ~ 12989842 (+)
G858203 NA other downstream 39443 15526389 ~ 15526807 (+)
G858416 NA other downstream 387083 15874029 ~ 15878692 (+)
G860453 NA other downstream 1614969 17101915 ~ 17102467 (+)
G860570 NA other downstream 1839294 17326240 ~ 17326929 (+)
G860846 NA other downstream 2008666 17495612 ~ 17499171 (+)

Expression


Co-expression Network