G858194


Basic Information

Item Value
gene id G858194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 15488649 ~ 15489008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU977965
atggcaatgagatagaagctgtttttcagtctctcggtctcagctttgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaagccgtggctcgggtggttgttgtccttgatctttttggcattcctgtgacatcgggtggtgtaggtgtcctggagggcaggtagtttgctagAGATAGCTTTAGGTAATAAAATACAGACATGGGCGAGTTGTTGAGAAGGAAGGATGGTGCTCTCTTCATGCTGATTTAATCAGAAATTGGACAAAGGGAATATCATAATCAATGGGAAGTCACCTCTGTGTCGTACTGTATGTCCTGTGCTGTCACTATATGCGCCACAACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU977965 True 360 lncRNA 0.47 1 15488649 15489008

Neighbor

gene id symbol gene type direction distance location
LOC110534855 LOC106603811 coding upstream 6431 15208176 ~ 15482337 (+)
ube2b ube2b coding upstream 302744 15171314 ~ 15185905 (+)
tcf7 skp1 coding upstream 358739 15066890 ~ 15138685 (+)
LOC110533377 LOC106603825 coding upstream 1058363 14279497 ~ 14430286 (+)
LOC110533378 LOC106603820 coding upstream 1213451 14224203 ~ 14275198 (+)
LOC110533411 LOC106603809 coding downstream 10625 15499633 ~ 15523339 (+)
LOC110533412 NA coding downstream 54762 15543770 ~ 15607192 (+)
sytl2a sytl2 coding downstream 126701 15615709 ~ 15662249 (+)
LOC110533414 LOC106603806 coding downstream 174477 15663485 ~ 15666551 (+)
LOC110533415 LOC106603804 coding downstream 192204 15681212 ~ 15993975 (+)
G858193 NA non-coding upstream 251 15488150 ~ 15488398 (+)
G858190 NA non-coding upstream 1703 15486614 ~ 15486946 (+)
G858183 NA non-coding upstream 6762 15481431 ~ 15481887 (+)
G858148 NA non-coding upstream 63149 15414440 ~ 15434748 (+)
G858195 NA non-coding downstream 114 15489122 ~ 15489354 (+)
G858196 NA non-coding downstream 508 15489516 ~ 15489971 (+)
G858204 NA non-coding downstream 37860 15526868 ~ 15527084 (+)
G858225 NA non-coding downstream 93561 15582569 ~ 15583374 (+)
G858176 NA non-coding downstream 101087 15590095 ~ 15622861 (+)
G856353 NA other upstream 1714067 13773887 ~ 13774582 (+)
G855498 NA other upstream 2467617 13016534 ~ 13021032 (+)
G855483 LOC106603848 other upstream 2498807 12985031 ~ 12989842 (+)
G858203 NA other downstream 37381 15526389 ~ 15526807 (+)
G858416 NA other downstream 385021 15874029 ~ 15878692 (+)
G860453 NA other downstream 1612907 17101915 ~ 17102467 (+)
G860570 NA other downstream 1837232 17326240 ~ 17326929 (+)
G860846 NA other downstream 2006604 17495612 ~ 17499171 (+)

Expression


Co-expression Network