G858204


Basic Information

Item Value
gene id G858204
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 15526868 ~ 15527084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU977975
ttgttgcaacatcgattaccagcctgttcaacctctctttcgtatcgtccgagatccctaaagattggaatgACTGCCGCGGTCatacccctcttcaaagggggtgacaccctagacccaaactgttacagacctatatccatcctgcctatctaaagtctttgaaagccaagttaataaacagatcactgaccatttcgaatctcaccgtaccttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU977975 True 217 lncRNA 0.46 1 15526868 15527084

Neighbor

gene id symbol gene type direction distance location
LOC110533411 LOC106603809 coding upstream 3529 15499633 ~ 15523339 (+)
LOC110534855 LOC106603811 coding upstream 44650 15208176 ~ 15482337 (+)
ube2b ube2b coding upstream 340963 15171314 ~ 15185905 (+)
tcf7 skp1 coding upstream 396958 15066890 ~ 15138685 (+)
LOC110533377 LOC106603825 coding upstream 1096582 14279497 ~ 14430286 (+)
LOC110533412 NA coding downstream 16686 15543770 ~ 15607192 (+)
sytl2a sytl2 coding downstream 88625 15615709 ~ 15662249 (+)
LOC110533414 LOC106603806 coding downstream 136401 15663485 ~ 15666551 (+)
LOC110533415 LOC106603804 coding downstream 154128 15681212 ~ 15993975 (+)
LOC110533419 LOC106603797 coding downstream 539314 16066398 ~ 16078694 (+)
G858196 NA non-coding upstream 36897 15489516 ~ 15489971 (+)
G858195 NA non-coding upstream 37514 15489122 ~ 15489354 (+)
G858194 NA non-coding upstream 37860 15488649 ~ 15489008 (+)
G858193 NA non-coding upstream 38470 15488150 ~ 15488398 (+)
G858190 NA non-coding upstream 39922 15486614 ~ 15486946 (+)
G858225 NA non-coding downstream 55485 15582569 ~ 15583374 (+)
G858176 NA non-coding downstream 63011 15590095 ~ 15622861 (+)
G858274 NA non-coding downstream 146644 15673728 ~ 15674032 (+)
G858275 NA non-coding downstream 153595 15680679 ~ 15680914 (+)
G858304 NA non-coding downstream 201405 15728489 ~ 15729710 (+)
G858203 NA other upstream 61 15526389 ~ 15526807 (+)
G858148 NA other upstream 92120 15414440 ~ 15434748 (+)
G856353 NA other upstream 1752286 13773887 ~ 13774582 (+)
G855498 NA other upstream 2505836 13016534 ~ 13021032 (+)
G858416 NA other downstream 346945 15874029 ~ 15878692 (+)
G860453 NA other downstream 1574831 17101915 ~ 17102467 (+)
G860570 NA other downstream 1799156 17326240 ~ 17326929 (+)
G860846 NA other downstream 1968528 17495612 ~ 17499171 (+)
cenatac ccdc84 other downstream 3534230 19057354 ~ 19068272 (+)

Expression


Co-expression Network