Gene
RNA
| Item | Value |
|---|---|
| gene id | G858811 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 15631851 ~ 15632395 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: synaptotagmin-like protein 2 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU978647 | True | 456 | lncRNA | 0.49 | 2 | 15631851 | 15632395 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sar1a | sar1a | coding | downstream | 132715 | 15491003 ~ 15499136 (-) |
| LOC110533385 | LOC106603813 | coding | downstream | 442969 | 15187394 ~ 15188882 (-) |
| LOC110534908 | LOC106603812 | coding | downstream | 460656 | 15157675 ~ 15171195 (-) |
| LOC110533384 | LOC106603816 | coding | downstream | 477578 | 15140812 ~ 15154273 (-) |
| LOC110533383 | skp1 | coding | downstream | 492197 | 15129962 ~ 15139654 (-) |
| LOC110534856 | LOC106603798 | coding | upstream | 386143 | 16018538 ~ 16057861 (-) |
| LOC110533417 | snrpd2 | coding | upstream | 432856 | 16065251 ~ 16068108 (-) |
| LOC110533418 | LOC106603795 | coding | upstream | 447235 | 16079630 ~ 16088437 (-) |
| LOC110533420 | LOC106603794 | coding | upstream | 461520 | 16093915 ~ 16117060 (-) |
| LOC110533421 | LOC106603793 | coding | upstream | 508923 | 16141284 ~ 16185730 (-) |
| G858717 | NA | non-coding | downstream | 94534 | 15536631 ~ 15537317 (-) |
| G858756 | NA | non-coding | downstream | 99494 | 15532140 ~ 15532357 (-) |
| G858749 | NA | non-coding | downstream | 107271 | 15524375 ~ 15524580 (-) |
| G858746 | NA | non-coding | downstream | 109972 | 15520932 ~ 15521879 (-) |
| G858732 | NA | non-coding | downstream | 144548 | 15487050 ~ 15487303 (-) |
| G858823 | sytl2 | non-coding | upstream | 28448 | 15660843 ~ 15662131 (-) |
| G858831 | NA | non-coding | upstream | 41141 | 15673536 ~ 15673934 (-) |
| G858833 | NA | non-coding | upstream | 42356 | 15674751 ~ 15675255 (-) |
| G858832 | NA | non-coding | upstream | 47221 | 15679616 ~ 15680008 (-) |
| G858913 | NA | non-coding | upstream | 166498 | 15798893 ~ 15913311 (-) |
| G858015 | NA | other | downstream | 513822 | 15117422 ~ 15118029 (-) |
| LOC110533380 | LOC106603823 | other | downstream | 1058947 | 14557109 ~ 14794250 (-) |
| G856863 | LOC106603829 | other | downstream | 1421469 | 14203533 ~ 14210382 (-) |
| G856872 | NA | other | downstream | 1424635 | 14205272 ~ 14207216 (-) |
| G856922 | NA | other | downstream | 1446877 | 14184287 ~ 14184974 (-) |
| G859594 | NA | other | upstream | 824153 | 16456548 ~ 16456847 (-) |
| LOC110533434 | LOC106603775 | other | upstream | 1889866 | 17520259 ~ 17545622 (-) |
| G862071 | tmem132e | other | upstream | 2769100 | 18401495 ~ 18405409 (-) |
