Gene
RNA
| Item | Value |
|---|---|
| gene id | G858304 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 15728489 ~ 15729710 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU978085 | True | 468 | lncRNA | 0.41 | 2 | 15728489 | 15729710 |
15,725,200
15,725,600
15,726,000
15,726,400
15,726,800
15,727,200
15,727,600
15,728,000
15,728,400
15,728,800
15,729,200
15,729,600
15,730,000
15,730,400
15,730,800
15,731,200
15,731,600
NC_048574.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533414 | LOC106603806 | coding | upstream | 61938 | 15663485 ~ 15666551 (+) |
| sytl2a | sytl2 | coding | upstream | 66240 | 15615709 ~ 15662249 (+) |
| LOC110533412 | NA | coding | upstream | 121297 | 15543770 ~ 15607192 (+) |
| LOC110533411 | LOC106603809 | coding | upstream | 205150 | 15499633 ~ 15523339 (+) |
| LOC110534855 | LOC106603811 | coding | upstream | 246271 | 15208176 ~ 15482337 (+) |
| LOC110533419 | LOC106603797 | coding | downstream | 336688 | 16066398 ~ 16078694 (+) |
| smtlb | LOC100196589 | coding | downstream | 1444099 | 17173809 ~ 17176871 (+) |
| LOC110533429 | nhlrc3 | coding | downstream | 1615681 | 17345391 ~ 17359625 (+) |
| emsy | LOC106603772 | coding | downstream | 1632975 | 17362685 ~ 17395892 (+) |
| klhl35 | klhl35 | coding | downstream | 1713205 | 17442915 ~ 17454534 (+) |
| G858275 | NA | non-coding | upstream | 47575 | 15680679 ~ 15680914 (+) |
| G858274 | NA | non-coding | upstream | 54457 | 15673728 ~ 15674032 (+) |
| G858176 | NA | non-coding | upstream | 105628 | 15590095 ~ 15622861 (+) |
| G858225 | NA | non-coding | upstream | 145115 | 15582569 ~ 15583374 (+) |
| G858204 | NA | non-coding | upstream | 201405 | 15526868 ~ 15527084 (+) |
| G858330 | NA | non-coding | downstream | 33688 | 15763398 ~ 15763699 (+) |
| G858377 | NA | non-coding | downstream | 92108 | 15821818 ~ 15830938 (+) |
| G858452 | NA | non-coding | downstream | 198840 | 15928550 ~ 15930598 (+) |
| G859112 | NA | non-coding | downstream | 401101 | 16130811 ~ 16131049 (+) |
| G859114 | NA | non-coding | downstream | 402114 | 16131824 ~ 16132028 (+) |
| G858203 | NA | other | upstream | 201682 | 15526389 ~ 15526807 (+) |
| G858148 | NA | other | upstream | 293741 | 15414440 ~ 15434748 (+) |
| tcf7 | skp1 | other | upstream | 615990 | 15066890 ~ 15138685 (+) |
| G856353 | NA | other | upstream | 1953907 | 13773887 ~ 13774582 (+) |
| G855498 | NA | other | upstream | 2707457 | 13016534 ~ 13021032 (+) |
| G858416 | NA | other | downstream | 144319 | 15874029 ~ 15878692 (+) |
| G860453 | NA | other | downstream | 1372205 | 17101915 ~ 17102467 (+) |
| G860570 | NA | other | downstream | 1596530 | 17326240 ~ 17326929 (+) |
| G860846 | NA | other | downstream | 1765902 | 17495612 ~ 17499171 (+) |
| cenatac | ccdc84 | other | downstream | 3331604 | 19057354 ~ 19068272 (+) |
